Query= MSMg01no371_j02.b1 MSMg01no371_j02.b1 CHROMAT_FILE:
MSMg01no371_j02.b1 PHD_FILE: MSMg01no371_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:03 2005
(378 letters)
>mm_chr4_103283316_103284093
Length = 778
Score = 675 bits (349), Expect = 0.0
Identities = 373/385 (96%), Gaps = 7/385 (1%)
Strand = Plus / Plus
Query: 1 actggaatgaa-------ctgaactccttattgctcaatcttccatccagtggccaggtc 53
||||||||||| ||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 194 actggaatgaatgtgtggctggactccttattactcaatcttccatccagtggccaggtc 253
Query: 54 ctttccaatatttccttctgttcagttttcagccattactctgtaacccacacaattccc 113
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 254 ctttccaatatttccttctgttcagttttcagccattactctgtaacacacacaattccc 313
Query: 114 aggaaccttagaggctacttagtccacagcctagaatatttagagcatgatcccagagag 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aggaaccttagaggctacttagtccacagcctagaatatttagagcatgatcccagagag 373
Query: 174 ggtaagtaaactggcttaaggttacactgtgccatagtgagagagctgaaattagaaccc 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggtaagtaaactggcttaaggttacactgtgccatagtgagagagctgaaattagaaccc 433
Query: 234 acctttagcctatactatcagaagccacacattgttaatttcacaaagaagtctccaagg 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tcctttagcctatactatcagaagccacacattgttaatttcacaaagaagtctccaagg 493
Query: 294 agagttgcaaaaatgtctcaggaaggtgatttaaagtgattttccttttctcttattgct 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agagttgcaaaaatgtctcaggaaggtgatttaaagtgattttccttttctcttattgct 553
Query: 354 ttctgaaccgcagaaacagattgga 378
||||||||| |||||||||||||||
Sbjct: 554 ttctgaaccccagaaacagattgga 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_j02.g1 MSMg01no371_j02.g1 CHROMAT_FILE:
MSMg01no371_j02.g1 PHD_FILE: MSMg01no371_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:03 2005
(527 letters)
>mm_chr4_103466588_103467514
Length = 927
Score = 996 bits (515), Expect = 0.0
Identities = 524/527 (99%)
Strand = Plus / Minus
Query: 1 ctcatcaatcaatattctcctggaatgtatgaaagattgggtctaagggcagcttcatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ctcatcaatcaatattctcctggaatgtatgaaagattgggtctaagggcagcttcatag 668
Query: 61 tttagttttttgatgtattcttttttgttctcttaggaaaaaaaatcataaaatctcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tttagttttttgatgtattcttttttgttctcttaggaaaaaaaatcataaaatctcaaa 608
Query: 121 gtgtcattaaccatgtgtctcaaccatctcttctttcatagtctgcaaagactcctagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gtgtcattaaccatgtgtctcaaccatctcttctttcatagtctgcaaagactcctagtt 548
Query: 181 agacccatacttgactgatctcaggggacccacagactgaccctcatctgatccccaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agacccatacttgactgatctcaggggacccacagactgaccctcatctgatccccaacc 488
Query: 241 tccttgtgcctcccttttcacatgtgtatctcacttcctctagacttccccacaaaagac 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 487 tccttgtgcctcccttttcacatgtgtatctcacttcctctagacttccccacaaaagcc 428
Query: 301 atgctattatccagctccacatctttgatagtatgccacagacaatatgagctatccttt 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atgctattacccagctccacatctttgatagtatgccacagacaatatgagctatccttt 368
Query: 361 cttatagtatctctgcctctcactcctcttcatacagtatcccatggcttctcctctctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cttatagtatctctgcctctcactcctcttcatacagtatcccatggcttctcctctctg 308
Query: 421 gagcctacagtgccttctccaggggtctttggcaggcttgcaggctcccagtctctctgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 307 gagcctacagtgccttctccaggggtctttggcaggcttgcaggctcccagcctctctgc 248
Query: 481 tcccatcctctgtacaaccttatgtattgcagctgtcaaatgacagc 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcccatcctctgtacaaccttatgtattgcagctgtcaaatgacagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
