GACTCCTATATTCAGAGGATCCGCGGAATTCTCCATCTTTTTCCTTACAC
AAATCCCACTGCAGGTCATAAGCAGCTGTGGTGGTAAGCGGCAGCAGCAA
GTGACTGTGTGCAGCTTGGTGTGTGGACAATAAGCATCCTCCTTGTTTGG
TTGTATGTTTCTCAGCTATGGGATCATTGACGTTTCATGGCGTGAAGCAA
CTGTACAGAGGTTACACACACAGATAATCTTTGTCTATATTTTATACAAA
TACAACAGTAGTTTGTGAATACATTTTAAGTACATGATATACATGATAAG
CCACTTGCTTTCCCAATATCACAGAGTAGCAATTTAAAATGCAATAAAAA
TATACAAAATTCAGTCTGGAATGCAGATTTTTTCATTTCTATTTGACTCA
AAAACTTTACCATTAGAACATTTTTAGAGTACTAGTCCAAACACTTTTTC
ATTAGCTAANAAAAAAAAAAAAAAAAAAACCAACAACAAAAAAAAAACAG
CAGTCAGCTTATGTTCAGGCATGATGCAATCCATTTCTCTAATGGATTCC
CAGTTTTTGTTAAATTCAAAGGGCTGTTAGTAACTCACAGCATGTTCTTC
ACTCCACACCCTATGTCAAGCCCCTTTCCCTTCTGAGTTAAGCCACTTTG
TGGACAAAACTGGGTTGTTCCGGAACATTTGCCCTTCCAAATTCCTTTTG
AAGGCCATTAAAAACCGGGGGGGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGTTTATCTTGCTGCAAAAATCATTAT
GCTTCAGCAACATACTATGTTTGGAACTACTTAGAGAATAAGGGATATGC
AGCATTATCATTATCATTATCATTATCATTATTATTATTATTATTATTAT
TATTATTATTATATTTTCTTTAATTACATTTCAAATGTTATTCCCTTTCC
TGGTTTCCCCTCTGAAAACCCCCTATCTCCTCTTCCCTCCCACTGCTCAC
CAACCCACCCACTCCTGCTTCCTGCCCCTGGCATTCTCCTATACTGGGAT
ATAGAACCTTCAAAGGACTAAGGGCCTCTCCTCCCATCGATGACCGACTA
GGCCATCCTCCACTACATATGCAGCTAGAGCCACAAGTCCCTCTGTGTGT
TTTCTTTGATTGGTGGTTTAGTCCCAGGGAGCTCTGGGGTTACTAGTTAG
TTCATATTATTGTTCCTCCTATGGGGCTGCAAACCCTTCAGCTCCTTGGG
TCCTTTCTCTAGCTCCTTCATTGGAGACCCTGTGCTCCATCCTATGGGTG
ACTGTGAAGCTCTACCTCCTGCATTTGACGGGAACGGGCCAAGCCTCCCC
CGGAAAAGCTTTTTTCGGTCCCCGGTACCACGCTCTTGTGGGCATCTGCC
ACGGGTCTGGGCCCTTTTCGCCATTCCCGTTCCATTATTTTTTCN

Query= MSMg01no373_p17.b1 MSMg01no373_p17.b1 CHROMAT_FILE:
MSMg01no373_p17.b1 PHD_FILE: MSMg01no373_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:03 2005
         (507 letters)



>mm_chr4_3825543_3826450
          Length = 908

 Score =  926 bits (479), Expect = 0.0
 Identities = 505/521 (96%), Gaps = 15/521 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttccttac-acaaatcccactgcaggtcataagcagctgtggtggtaagcggcagcagc 59
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttccttacaacaaatcccactgcaggtcataagcagctgtggtggtaagcggcagcagc 260

                                                                       
Query: 60  aagtgactgtgtgcagcttggtgtgtggacaataagcatcctccttgtttggttgtatgt 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtgactgtgtgcagcttggtgtgtggacaataagcatcctccttgtttggttgtatgt 320

                                                                       
Query: 120 ttctcagctatgggatcattgacgtttcatggcgtgaagcaactgtacagaggttacaca 179
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctcagctatgggattattgacgtttcatggcgtgaagcaactgtacagaggttacaca 380

                                                                       
Query: 180 cacagataatctttgtctatattttatacaaatacaacagtagtttgtgaatacatttta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacagataatctttgtctatattttatacaaatacaacagtagtttgtgaatacatttta 440

                                                                       
Query: 240 agtacatgatatacatgataagccacttgctttcccaatatcacagagtagcaatttaaa 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtacatgatatacatgataagccacttgctttcccaatatcacagagtagcaatttaaa 500

                                                                       
Query: 300 atgcaataaaaatatacaaaattcagtctggaatgcagattttttcatttctatttgact 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgcaataaaaatatacaaaattcagtctggaatgcagattttttcatttctatttgact 560

                                                                       
Query: 360 caaaaactttaccattagaacatttttagagtactagtccaaacactttttcattagcta 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaaactttaccattagaacatttttagagtactagtccaaacactttttcattagcta 620

                                                                       
Query: 420 anaaaaaaaaaaaaaaaaaaa------------ccaacaacaa-aaaaaaaacagcagtc 466
           | |||||||||||||||||||            |||||||||| ||||||||||||||||
Sbjct: 621 a-aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccaacaacaacaaaaaaaacagcagtc 679

                                                    
Query: 467 agcttatgttcaggcatgatgcaatccatttctctaatgga 507
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agcttatgttcaggcatgatgcaatccatttctctaatgga 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 908
Length adjustment: 10
Effective length of query: 497
Effective length of database: 898
Effective search space:   446306
Effective search space used:   446306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)