Query= MSMg01no374_p05.b1 MSMg01no374_p05.b1 CHROMAT_FILE:
MSMg01no374_p05.b1 PHD_FILE: MSMg01no374_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:22 2005
(545 letters)
>mm_chr4_104533052_104533996
Length = 945
Score = 1025 bits (530), Expect = 0.0
Identities = 536/538 (99%)
Strand = Plus / Minus
Query: 8 ttcctggaagtaactcttgtttcctgagggagcttgtatcaccctggtaatgtgatatca 67
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttcctggaagtaactcttgttccctgagggagcttgtatcaccctggtaatgtgatatca 686
Query: 68 cccacactttctatctttttctacccaagggtcctccttccctgtctacagtccctctcc 127
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 685 cccacactttctatctttttctacccaagggtcctccttccctgtctatagtccctctcc 626
Query: 128 tctcagcccaatttctttcattttcaaggttattgtcttccatgaagtcttcctagatgt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctcagcccaatttctttcattttcaaggttattgtcttccatgaagtcttcctagatgt 566
Query: 188 cccccagggcagctctgctcagatgcatctgacctttctaacagccttgctcatggtaca 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cccccagggcagctctgctcagatgcatctgacctttctaacagccttgctcatggtaca 506
Query: 248 ctctggacaatctaacagtaaagaaagtgggcttctgtgtgagacagaaccttgaccctc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctctggacaatctaacagtaaagaaagtgggcttctgtgtgagacagaaccttgaccctc 446
Query: 308 tttgttgtttgagtcacttctcagaccacagttcttctgttgagctgaaattagcctcca 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgttgtttgagtcacttctcagaccacagttcttctgttgagctgaaattagcctcca 386
Query: 368 ttctaatttatcttcaccatacaccttacatccaggctcaattgcccacatgactcacgc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttctaatttatcttcaccatacaccttacatccaggctcaattgcccacatgactcacgc 326
Query: 428 tctgtcttcctgcacattaatcagtttgtttctttttctctagagtgtcttcattcatat 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgtcttcctgcacattaatcagtttgtttctttttctctagagtgtcttcattcatat 266
Query: 488 cctaatatggttgacttcttgtctagtgctgtggactgaattgtggtcctgtccaatt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctaatatggttgacttcttgtctagtgctgtggactgaattgtggtcctgtccaatt 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_p05.g1 MSMg01no374_p05.g1 CHROMAT_FILE:
MSMg01no374_p05.g1 PHD_FILE: MSMg01no374_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:22 2005
(476 letters)
>mm_chr4_104387022_104387898
Length = 877
Score = 901 bits (466), Expect = 0.0
Identities = 472/474 (99%), Gaps = 1/474 (0%)
Strand = Plus / Plus
Query: 1 ctac-catatcctgaaggatcctgggatctcctgttgccaaaacatggggaataagtgtg 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacacatatcctgaaggatcctgggatctcctgttgccaaaacatggggaataagtgtg 260
Query: 60 tgagagaatgtgttgtgaaggccagccagtggcatctcgttccctcaactgtgttacctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagagaatgtgttgtgaaggccagccagtggcatctcgttccctcaactgtgttacctt 320
Query: 120 gcaacagtcatgttgaaagaagggatggggcacaaatcgtgaagcagctatacagtctcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaacagtcatgttgaaagaagggatggggcacaaatcgtgaagcagctatacagtctcc 380
Query: 180 catatgcttaggaaactattacttatttaatcaaagtggctagaccagggcaaggcctga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catatgcttaggaaactattacttatttaatcaaagtggctagaccagggcaaggcctga 440
Query: 240 tgggggatatcaaggggctggacccaaacctctcaaagccttcatttctcaaacactggc 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggggatatcaaggggctggtcccaaacctctcaaagccttcatttctcaaacactggc 500
Query: 300 cttagcaggtcagcctcagtccaccttctgctgcaaagtacccagtagcttctaaaagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttagcaggtcagcctcagtccaccttctgctgcaaagtacccagtagcttctaaaagaa 560
Query: 360 acatctgccacctagagctacatctctaccagaagccctttggaatgctagtgttggcag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatctgccacctagagctacatctctaccagaagccctttggaatgctagtgttggcag 620
Query: 420 gcaatcctctagcatgagcaggcatctctagttatagctgtaaatagcctcccc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcaatcctctagcatgagcaggcatctctagttatagctgtaaatagcctcccc 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 877
Length adjustment: 10
Effective length of query: 466
Effective length of database: 867
Effective search space: 404022
Effective search space used: 404022
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
