Query= MSMg01no375_g14.b1 MSMg01no375_g14.b1 CHROMAT_FILE:
MSMg01no375_g14.b1 PHD_FILE: MSMg01no375_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:00 2005
(503 letters)
>mm_chr4_131855361_131856263
Length = 903
Score = 843 bits (436), Expect = 0.0
Identities = 469/480 (97%), Gaps = 2/480 (0%)
Strand = Plus / Minus
Query: 25 gcctccacctcccatagtgatggggctacaggcatgccccaccatgcctggttacttcgt 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 gcctccacctcccatagtgatggggctacaggcatgccccaccatgcctggttacttcgt 844
Query: 85 ccacaatgggataggttattcaggttaacttgaaccagttgtttcttgtcattgtcactt 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ccacaatgggataggttattcaggttaacttgaaccagttgtttcttgtcattgtcactt 784
Query: 145 agaatggttgagtgggtaacactcagaagttgtgacaggaggatcaggagttccaggcct 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 agaatggttgagtgggtaacactcagaagttgtgacaggaggatcaggagttccaggcct 724
Query: 205 ctctgggttatgcagtgagaaggatctcagaaacaaaatgaaacaagccttctactcagg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ctctgggttatgcagtgagaaggatctcagaaacaaaatgaaacaagccttctactcagg 664
Query: 265 gttgggagaacaagtctggaaatcccctgtcacccaggtgagagccactcagggaaagga 324
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 663 gttgggagaacaagtctggaaatcccctgtcacccaggtgggagccactcagggaaaaga 604
Query: 325 tgatgtcattgtgcccagtattttcctgtagtgtctagaaggctacaatcacacagctac 384
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 603 tgatgtcattgtgcccagtaccttcctgtagtgtctagaaggctacaatcacacagctgc 544
Query: 385 aaaataggaataccagcagctttggtctcac-agggctgtggtgggactgacctgctata 443
|||| |||||||||||||||||||||||||| |||| |||||||||||||||||| ||||
Sbjct: 543 aaaacaggaataccagcagctttggtctcacaaggg-tgtggtgggactgacctgttata 485
Query: 444 agaactcttcccacagtgtggactcatgtccatgggctcctgtggctcaggtcttctcca 503
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 484 agaactcttcccacagtgtggactcatgtctatgagctcctgtggctcaggtcttctcca 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_g14.g1 MSMg01no375_g14.g1 CHROMAT_FILE:
MSMg01no375_g14.g1 PHD_FILE: MSMg01no375_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:00 2005
(435 letters)
>mm_chr4_131684574_131685408
Length = 835
Score = 787 bits (407), Expect = 0.0
Identities = 428/435 (98%)
Strand = Plus / Plus
Query: 1 actctgtagagcaggctggccttgaactcagagatccacctgcctcagctgggattaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtagagcaggctggccttgaactcagagatccacctgcctcagctgggattaaag 260
Query: 61 gtgggcagcaccacggtccagacacttgtggacgggcttacatgctggggacacacaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgggcagcaccacggtccagacacttgtggacgggcttacatgctggggacacacaagt 320
Query: 121 cattctccactgaaccagcaaagccacaggaacatcactatcccctttttacaggtggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattctccactgaaccagcaaagccacaggaacatcactatcccctttttacaggtggag 380
Query: 181 aaggctgaggggtggagaggtgaagctgactagcaggccttaaattaggtctccagttcc 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 aaggctgaggggtggagaggtgaagctgactagcaggccttaagttaggtctccagttcc 440
Query: 241 tgtttttctaaaattcaagttcaatccctttgttttacaaatgaaggctctgaggctgtg 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggattctaaaattcaagttcaatccctttgttttacaaatgaaggctctgaggctgtg 500
Query: 301 ctatagcagtgaccccagaggctgggtgcacagagagggaacagagatgagtcatcaaag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 ctatagcagtgaccccagaggctgggtgcacagagagggaacagagatgagtcaacaaag 560
Query: 361 cctgtaccagcagcccgggggtccagctggagctccctttatttgcagacaaagggtgat 420
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgcaccagcagcccaggggtccagctggagctccctttatttgcagacaaagggtgat 620
Query: 421 tgctctcccaaagga 435
|||||||||||||||
Sbjct: 621 tgctctcccaaagga 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
