TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CAATGATTCTTGAAGTTGATTGATGGAAGTTTCAATTTTCTCTATATCTA
AATCAATGGCTGCCCTCAGACTGTCACAATTTTTCCCTTGTAAGACCAAA
GTGGAGGTCTCAGTGACTGCCCTGTGCACTCACAATCTCAACAGAAAGGA
GACAGTAAGAGCTGTAACAGGTTTGGTGGACAGGCTTATAGGATGGAGGA
AGGAAACAGAATCTAAAGGTGCCACCAGGCTGTCATGATAAAGATCAGTG
ATCTTGAACTTAAGCAGATTGTCGTCCCATACAGCAGGGAACCCCCAGAG
AGCAGGGTGTCTGCCGGTTTCATATGGGAAGCATGCACCCAGGCTGCAAT
ACCATCCACCTTGACCACTGTGGGAGTGGTTAACATCACCAGGAAGGGTT
TCTTCCACTGGGGTTCCAGCAACTGTGCCCAGTGCCTCCTTATATAGACC
CAGTCACCAGTCTGGAAGCAGTGAGGGGTCCCTGGCATACCAGGAATATT
TAAGGCTAACAGTTTGGGCCAAATCTAATGTTGTCTTGACTTAATAGGTT
CCTATTCGTGATTTGGGATACCTCCAGTGTACCCCATTTAAAGGTACGTT
ACCTAAATTGATTTCAAAAGGGTGCCAGGTAATATGTGTTGTTTTGTTTC
CAGTTCTTAAAAGGACCTCTGTTATGTACATTGTTCCATTCCTTGATTA

TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATTGGGTTTTTAAAAACAAGACCTGAATT
CAGATGGAAAATGGGAAACTGTGGCAACGTTCCATTGACAGCTAGAGGGA
ATGAGTGGAAAAGGATATTAGCAAGATGCATTGCACTTTTTTGAAATTTT
CAAAAGATAAAGGGATGCTGATAATATTGTTTCCAGTATAATAGAAGTTG
TGTGGATCATATGATAAAGGTACCTTTATGTCTGTAATTTTATAATATCC
CTATTAATCAAGTCCTTCATGAAATGTTTCATTTTATTGTTTTACTTTCA
CCCTCCCATTTATCCCTCCTCTCTGTCTCCTCAGAAAAGCAAAGGCCTTC
CATTAATATCAATCAGCGTTTGTCTATCAAGTTACAGTAAGACTAGGCTT
ACCTTCTTTTACTGAAGCTAGGGAAAGCAGCCAAGTTACAGGAAAGGGAT
CCAATAACAGGCAGTATTATCTTTAAAGTCAGCTGGATACTAAATTTCTC
AGATGANAGCAGCCATCTGAGGATTGAGAACATCTCCCTCTAAGAGTGTC
TTGGAGAAACCATGTCTAACTGCAGTCTAACTCAGAGACATGGGTAGGAA
GTAACAACAACAACACCCAAAGCACAATACATGTGNCTCATTTCCATTTT
TCTACTCCCACACTCTGCCTTATCAAACAGATGTGAGGCACCTTCCTCC

Query= MSMg01no376_o04.g1 MSMg01no376_o04.g1 CHROMAT_FILE:
MSMg01no376_o04.g1 PHD_FILE: MSMg01no376_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:53 2005
         (565 letters)



>mm_chr4_96011261_96012225
          Length = 965

 Score =  895 bits (463), Expect = 0.0
 Identities = 475/479 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attgggtttttaaaaacaagacctgaattcagatggaaaatgggaaactgtggcaacgtt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 479 attgggtttttaaaaacaagacctgaattcagatggaaaatgggaaactgtggcaatgtt 420

                                                                       
Query: 61  ccattgacagctagagggaatgagtggaaaaggatattagcaagatgcattgcacttttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ccattgacagctagagggaatgagtggaaaaggatattagcaagatgcattgcacttttt 360

                                                                       
Query: 121 tgaaattttcaaaagataaagggatgctgataatattgtttccagtataatagaagttgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tgaaattttcaaaagataaagggatgctgataatattgtttccagtataatagaagttgt 300

                                                                       
Query: 181 gtggatcatatgataaaggtacctttatgtctgtaattttataatatccctattaatcaa 240
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gtggatcatatgataaaggtagctttatgtctgtaattttataatatccctattaatcaa 240

                                                                       
Query: 241 gtccttcatgaaatgtttcattttattgttttactttcaccctcccatttatccctcctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gtccttcatgaaatgtttcattttattgttttactttcaccctcccatttatccctcctc 180

                                                                       
Query: 301 tctgtctcctcagaaaagcaaaggccttccattaatatcaatcagcgtttgtctatcaag 360
           |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 179 tctgtctcctcagaaaagcaaaggccttccattaatatcaatcagcatttgtttatcaag 120

                                                                       
Query: 361 ttacagtaagactaggcttaccttcttttactgaagctagggaaagcagccaagttacag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ttacagtaagactaggcttaccttcttttactgaagctagggaaagcagccaagttacag 60

                                                                      
Query: 421 gaaagggatccaataacaggcagtattatctttaaagtcagctggatactaaatttctc 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59  gaaagggatccaataacaggcagtattatctttaaagtcagctggatactaaatttctc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)