Query= MSMg01no377_b14.b1 MSMg01no377_b14.b1 CHROMAT_FILE:
MSMg01no377_b14.b1 PHD_FILE: MSMg01no377_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:10 2005
(369 letters)
>mm_chr4_39343502_39344269
Length = 768
Score = 665 bits (344), Expect = 0.0
Identities = 359/364 (98%), Gaps = 1/364 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgcttgccaatttctgcctcagtgatgctgacattcttcctacctattaattt 64
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgcctgtcaatttctgcctcagtgatgctgacattcttcctacctattaattt 264
Query: 65 ccatgaaagaacttgacttgtggtgtgagcttttactttcatataaaatactagattagg 124
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccatgaaagaactcaacttgtggtgtgagcttttactttcatataaaatactagattagg 324
Query: 125 aattttgcatttttatgacaatattttccaacctatgtcagcctttgctctctttcctct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aattttgcatttttatgacaatattttccaacctatgtcagcctttgctctctttcctct 384
Query: 185 ttttgcatgttacccttcaacctaaactactgggtttatctgagttcttccagtaccttt 244
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttt-catgttacccttcaacctaaactactgggtttatctgagttcttccagtaccttt 443
Query: 245 ttgcctaatagaagactctcggatactgaattgcattctacatatactcattgaattcta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgcctaatagaagactctcggatactgaattgcattctacatatactcattgaattcta 503
Query: 305 aagccctaaaataggggaagggaattcctatctcttagatctcatgttctgttatatact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagccctaaaataggggaagggaattcctatctcttagatctcatgttctgttatatact 563
Query: 365 ggtg 368
||||
Sbjct: 564 ggtg 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 768
Length adjustment: 9
Effective length of query: 360
Effective length of database: 759
Effective search space: 273240
Effective search space used: 273240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_b14.g1 MSMg01no377_b14.g1 CHROMAT_FILE:
MSMg01no377_b14.g1 PHD_FILE: MSMg01no377_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:10 2005
(434 letters)
>mm_chr4_39503195_39504027
Length = 833
Score = 816 bits (422), Expect = 0.0
Identities = 431/434 (99%), Gaps = 1/434 (0%)
Strand = Plus / Minus
Query: 1 actggctttctacactgcattctcaggatatttgctcttttggtgatgaaaagtggctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 830 actggctttctacactgcattctcaggatatttgctcttttggtgatgaaaagtgactct 771
Query: 61 catcacaagattcttgaaactatatttctcaaggcagttggagaatcacccaaaggatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 catcacaagattcttgaaactatatttctcaaggcagttggagaatcacccaaaggatat 711
Query: 121 aatccctagtctaagctgtagtacatttgtggagaagcttgccaaggaccaaccttgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aatccctagtctaagctgtagtacatttgtggagaagcttgccaaggaccaaccttgtct 651
Query: 181 tggaaaggagttctgggttgctatggtagttgctatagctccatcagaatgtatacaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tggaaaggagttctgggttgctatggtagttgctatagctccatcagaatgtatacaacc 591
Query: 241 cacctgactccaacttttctatatgtatcatgctgccagttcttcactaccacaataacc 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 590 cacctgactccaacttttctatatgtatcatgctgcca-ttcttcactaccacaataacc 532
Query: 301 ctagtagtcagggtgtcaggtccaaaacatgtagcatgttgcaatgcatctctgggtcca 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 531 ctagtagtcagggtgtcaggtccaaaacatgtaggatgttgcaatgcatctctgggtcca 472
Query: 361 atgagggagagtttgggagtggtgaaagaaacaacttgaagtcaattatggttacaagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atgagggagagtttgggagtggtgaaagaaacaacttgaagtcaattatggttacaagcc 412
Query: 421 aacagcacagtgtt 434
||||||||||||||
Sbjct: 411 aacagcacagtgtt 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 833
Length adjustment: 9
Effective length of query: 425
Effective length of database: 824
Effective search space: 350200
Effective search space used: 350200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
