NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCACAGGATTCTTACAACAGTATAGAATCCCCCCATAGGGTTTA
GGACTGGAGGTTACAGCTGGTTTGAAGTGACCTAAGAGGACAGAGAGCTT
TTCACATTCATAGGTATGTCTGCATATGAGTGTGTGTGTGTGTGTGTGTG
TGTGTCCTGTCTCTCCCTTGTCCCTTATTCTGCGCTCCATTTGTTCCCAC
TCCTGTTGGTAGATGTTCCTTGTGCTTGCCAACAATGAGGGCCACCACTC
ATTGTTTAGCATAGCCTTGAAGTCTCACAGCCCACACTCTTTTCACCAGA
TGAGGAGAAACACTGCTTGGAGAACAGGCACGCAATTATAACTCTCACCA
AGCAGCCTCAGTGGTATAGAGGTAGGCTCCCTGCCACTGTATCAGAGCAG
GAAGGGGAAACCTACACCTCCCACCTCCCACCTCCCACCTCTGTCCTATA
TTATATACCTCCTTGCCTTCTTTCCCCTGGAGGTTTCTACAACTCCCCAC
TGGGGCTTCCTGTCTTAACAACCTCACTCCCATAATTTTGCAAGCTGCCC
CTCTCACAAAGGACTCTGTACTTCTCTGTTCTAGGAAAAAAAAATTTCTT
TTCTTTGATCCCCCGTCTTTTCACATCTTGCCTTTTAAGCCTGCTGGGAA
AAACCACCCAAGCTATTGGAAAGGCCCGCTTCCCTCTTAAGAATTCCCCC
TTTTTTACCAATGTGACAAAAGACCTCTTCCCAC

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCACATAAAAGCTAAACATTCCTA
GATGCCTTAATGAAAGAAGATGTGGCCACAGCAAGGAGAAAGCAGAGGAT
GGTGGGCACACCTGTAACCTCAGTTCTTTGGAAGTGAAAGCAGGAGAATA
TTTGGGAGTTTAAAGTTATTCTCAACTATGTAGCGAGTTCAACTTGTGTA
TAAAAGACCACTATAGGGCTGGAGAGGATGGCTCAGTGGTCAAGAACACT
GACTGCTCTTCCGGAGGTCCTGAGTTTAATTCCCAGCAACCAGATGGTGG
CTCACAACCATCTGTAATGGGATCCAATGCCCTCTTCTGGTGTGTCTGAA
GAGAGCAACAGTGCACTCATATACATTAAATTAATTAATAATATATAAAT
AAGACAGATTATAACTGAGTGGATAGAAAACAGATGCATCGTGTACATGA
AAGAGTCAGGAGGCAGCCTCTTCTACTTTCCCATGAAGTATATGGCAGTT
TAAAAAAAATCGGTCGAAGTTTGGCCCAGTGGCTTGCACCTGCAGATCAG
GCGCTCCTAAAGCTCCAGATGTTCCTCCTTTGTGTCCGGACACATCCTGG
GATTACCCATTTTTTCCTTTCTTCTTTCCAACACTAGCCCCCCCTCCTCT
CGCGCATTGGCGCATTTACTACTCCCGTTTTTCTTTTCCATCCCACGGTT
CTATCCCCCCTTCTATCACCCTGTTTTCCCCGCCTCTTTTTT

Query= MSMg01no378_g16.b1 MSMg01no378_g16.b1 CHROMAT_FILE:
MSMg01no378_g16.b1 PHD_FILE: MSMg01no378_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:54 2005
         (496 letters)



>mm_chr4_122599278_122600173
          Length = 896

 Score =  891 bits (461), Expect = 0.0
 Identities = 485/497 (97%), Gaps = 8/497 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacagtatagaatcccccc-atagggtttaggactggaggttacagctggtttgaagtga 59
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aacagtatagaatcccccccatagggtttaggactggaggttacagctggtttgaagtga 259

                                                                       
Query: 60  cctaagaggacagagagcttttcacattcataggtatgtctgcatatgagtgtgtgtgtg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 260 cctaagaggacagagagcttttcacattcataggtatgtctgcatatgagtgtgtgtttg 319

                                                                       
Query: 120 tgtgtgtgtgtgtgtcctgtctctcccttgtcccttattctgcgctccatttgttcccac 179
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 320 tgtgtgtgtgtgtgtcctgtctctcccttgtcccttgttctgcgctccatttgttcccac 379

                                                                       
Query: 180 tcctgttggtagatgttccttgtgcttgccaacaatgagggccaccactcattgtttagc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcctgttggtagatgttccttgtgcttgccaacaatgagggccaccactcattgtttagc 439

                                                                       
Query: 240 atagccttgaagtctcacagcccacactcttttcaccagatgaggagaaacactgcttgg 299
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atagccttgaagtcacacagcccacactcttttcaccagatgaggagaaacactgcttgg 499

                                                                       
Query: 300 agaacaggcacgcaattataactctcaccaagcagcctcagtggtatagaggtaggctcc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agaacaggcacgcaattataactctcaccaagcagcctcagtggtatagaggtaggctcc 559

                                                                       
Query: 360 ctgccactgtatcagagcaggaaggggaaacctacacctcccacctcccacctcccacct 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct: 560 ctgccactgtatcagagcaggaaggggaaacctacacctcccacctcccacctc------ 613

                                                                       
Query: 420 ctgtcctatattatatacctccttgccttctttcccctggaggtttctacaactccccac 479
            ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 614 -tgtcctatattatatacctccttgcctcctttcccctggaggtttctacaactccccac 672

                            
Query: 480 tggggcttcctgtctta 496
           |||||||||||||||||
Sbjct: 673 tggggcttcctgtctta 689


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space:   430596
Effective search space used:   430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)