Query= MSMg01no378_m24.b1 MSMg01no378_m24.b1 CHROMAT_FILE:
MSMg01no378_m24.b1 PHD_FILE: MSMg01no378_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:23 2005
(418 letters)
>mm_chr4_41045402_41046219
Length = 818
Score = 785 bits (406), Expect = 0.0
Identities = 412/414 (99%)
Strand = Plus / Minus
Query: 5 gaattcgggttttcagtctgccctggcaagcgctcttcctgttgagcctactcccggggc 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gaattcgggttgtcagtctgccctggcaagcgctcttcctgttgagcctactcccggggc 559
Query: 65 cccagcttaattacttaaaagagtagatttacatcgatgggagtgggaaaggaggagtta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cccagcttaattacttaaaagagtagatttacatcgatgggagtgggaaaggaggagtta 499
Query: 125 aaaacagctggaattcacatgatgtagcatgtgacatgtcaagacaacagcagctcagcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaaacagctggaattcacatgatgtagcatgtgacatgtcaagacaacagcagctcagcc 439
Query: 185 aagggggaaggtccacaaggagaaagcccaggtatcccggcccgcacgtggcgcgtccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aagggggaaggtccacaaggagaaagcccaggtatcccggcccgcacgtggcgcgtccag 379
Query: 245 acggtgtgaccaggtcacaggacatataccatgctaatcaacacatgcaacatgtgacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 acggtgtgaccaggtcacaggacatataccatgctaatcaacacatgcaacatgtgacat 319
Query: 305 gttcccagggcacaggaagcgctggtgaattctggttagaactctgcatacacctgccta 364
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gttcccagggcacacgaagcgctggtgaattctggttagaactctgcatacacctgccta 259
Query: 365 ccagggtcgtcactctgaggtctcttcccactagaggtttatagcctcctttaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ccagggtcgtcactctgaggtctcttcccactagaggtttatagcctcctttaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_m24.g1 MSMg01no378_m24.g1 CHROMAT_FILE:
MSMg01no378_m24.g1 PHD_FILE: MSMg01no378_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:23 2005
(300 letters)
>mm_chr4_40898834_40899532
Length = 699
Score = 559 bits (289), Expect = e-164
Identities = 295/297 (99%), Gaps = 1/297 (0%)
Strand = Plus / Plus
Query: 1 atcttgggaaataactagaaaaatataaataagatgaaatgagacggagagtaaggccag 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 atcttgggaaataactagaaaaatataaataagatgaaatgagatggagagtaaggccag 260
Query: 61 gagtggagacacccacattgccagcatttggaagctgaagcaggaaaatcactataagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtggagacacccacattgccagcatttggaagctgaagcaggaaaatcactataagtt 320
Query: 121 tgaggctggcctagactacaaaatcctttctcaaaaaatagaaaaaagagcaaatactat 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaggctggcctagactacaaa-tcctttctcaaaaaatagaaaaaagagcaaatactat 379
Query: 181 gttgttaagtgggactagttaaaacttaaatatacccaagggaaaaagactttggaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gttgttaagtgggactagttaaaacttaaatatacccaagggaaaaagactttggaggga 439
Query: 241 tttttgtaagagtgggtagttttaaaatgatttgtggttgggtttgtttgctattta 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttttgtaagagtgggtagttttaaaatgatttgtggttgggtttgtttgctattta 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 699
Length adjustment: 9
Effective length of query: 291
Effective length of database: 690
Effective search space: 200790
Effective search space used: 200790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
