Query= MSMg01no379_b24.b1 MSMg01no379_b24.b1 CHROMAT_FILE:
MSMg01no379_b24.b1 PHD_FILE: MSMg01no379_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:48 2005
(385 letters)
>mm_chr4_119453409_119454193
Length = 785
Score = 501 bits (259), Expect = e-146
Identities = 268/271 (98%)
Strand = Plus / Plus
Query: 5 gaattcactggccttgcaataactttctgagtttggtacgagttgttcctcctctggcct 64
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactagccttgaaataactttctgagtttggtacgagttgttcctcctctggcct 264
Query: 65 aagaatggcctgcccttggatgagtgccgactgggtgtgcttccttccacacgaagccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagaatggcctgcccttggatgagtgccgactgggtgtgcttccttccacacgaagccca 324
Query: 125 cagcagggtccttgatctccaagcatggccttgctggtccatcagcttgcagatggatct 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagcagggtccttgatctccaagcatggccttgctggtccatcagcttgcagatggatct 384
Query: 185 gatttcattcagcagcggatctctccatggccattgaccagtgtagatcttacatgtgct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatttcattcagcagcggatctctccatggccattgaccagtgtagatcttacatgtgct 444
Query: 245 acaagtactacggtgatctgaatgaaaatgt 275
|||||||||||||||||||||||||||||||
Sbjct: 445 acaagtactacggtgatctgaatgaaaatgt 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_b24.g1 MSMg01no379_b24.g1 CHROMAT_FILE:
MSMg01no379_b24.g1 PHD_FILE: MSMg01no379_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:48 2005
(333 letters)
>mm_chr4_119612378_119613110
Length = 733
Score = 586 bits (303), Expect = e-172
Identities = 324/333 (97%), Gaps = 4/333 (1%)
Strand = Plus / Minus
Query: 1 cacgggtcggacacagtgggacatgtgaaggtgacaccaaggcactggtaggtcgaagca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 343 cacgggtcggacacagtgggacatgtgaaggtgaaaccaaggcactggtaggtcgaagca 284
Query: 61 tgaactcatacactgtggttctaggtttgacactttctgctcagcagccatctgcaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgaactcatacactgtggttctaggtttgacactttctgctcagcagccatctgcaggac 224
Query: 121 caagaatagaagcacagcaggtaggcccttgagctggctcagcaggtagaagctgctgcc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 223 caagaatagaagcacagcaggtaggcccttgagctggctcagcaggtggaagctgctgcc 164
Query: 181 aggccgaatgacatgaatccaatcacctggacccgtggagagacaatgaggagtcactcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aggccgaatgacatgaatccaatcacctggacccgtggagagacaatgaggagtcactcc 104
Query: 241 cacaagttgtcctctgaatgaccttcacatgcatgctgtggaacacacgcacacacacac 300
|||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 103 cacaagttgtcctctgaatgtccttcacatgcatgctgtggaacacacg----cacacac 48
Query: 301 acacctttacatacatgcacatgtgtgtgtgta 333
||||||||||||||| ||||||||||||||||
Sbjct: 47 acacctttacatacacacacatgtgtgtgtgta 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
