XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTC
CCTGTCTCATTATTGCTGCAATTTATTGTTCTCAAAAATGCTGCATAACG
AACCTAATGGATAGTAATTTCTAGGGTCACACCCTCCATCTGGTAATGTC
CCATGGGGCCAGACACTGAAAGGAATCTCTCTGTACTTCCACCCATCACT
CACTTCCTCAGGATACCCCAGATAAGGCTACACCCATATCAGTTGTAAAT
ACCTCAAGAAATATAGGATATATGTCTTTCTTTTAACTGCAGCTAGAAGA
GGGTTCATGTCCTTAATTCCCTTCCCAGAGCAGGGAAGGAATGCTGAAAT
TGAATTCCTGTAAAGGTCCCTACCATCTCCACTCATCACACTGAGTTTTC
TTTGCGTTTGAATGGATGCACTCAGGTTAGACATAGGCAGCTATGCAGAC
TGCTCTCTAATGTCAGTGATTTGCAGACTACTGAACTCTCCATTCAGAAG
CATAAAGTCTTAATACACAGTTACAATAAACTATTATTTTATGCTACTTT
CACTTAAAGCTTGATTGAAAAAGAAAGCAACTAATAGGTAGACATTCCAT
TCTATGTATTCATGCAAACATATCCAAAATTTGTGTGCTTGCCATCTTTT
TCTGATTCCCTTCTAACATTAAACTCTGTCTGCTTCATCTTCCAGTCCAA
GGTCAATGACTCTATTTCTTTCACAACATTCGATTCACTCTGACTTTN

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTTGGTTGGTGGTTTATTCTCTGGAAGCTCTGG
GGTGTCTGGTTGGTTGCTGTTGTTGTTCTTCATATGGGGTTGCAAAGCCC
TTCAGTTCCTTCAGTCCTTGCCCTAACTCCTCCATTGGGGTCCCTGTGCT
CAGTTCAATAGTTAGCTGAAAGCATCCACATCTGTATCAGTAAGGCTCTG
GTCGAGGCTTTCAGGAGATATCCATATCAGATTCCTGTCAGCAAGCATTT
CTTGGCATCACCAATAGTGTCTGAGTTTGGTGGCTGCATATAGGATGGAT
CCCCAGGTGGGACAGTTTCTGGATGGCTTTTCCTTCAGTCTCTGCTCCAA
AAGATGCTCCAACATATAACAAAGTCACATGCTCCACTATGCTCATAGCA
GCCTTATTTATAATAGTCAGGAGCTGGAAACAACCCAGATGTCCCTCAAC
ATCTGTGTCCCCCAGATGGATACAAAAAATGTGATACACATTCCACAATG
GAGTACTACTCAGCCATTAGAAACAATGACCTCATGAAATTTGTATGCAA
ATGGGTAGAAATATAAAATAATCCTTATTGAGATGACACCGCCCCCAAAA
GATACATCATGGTTTTGTACCCCCCGGATTAGTGGGAAATTAAGAAAAAT
GACTTTTTTTAAATAAATGGTGTTTCCACAACCCAATCCGCGGGGTGTTT
CATTCTCACTTTTTTTTCCCACATATTACTTTCATAACAA

Query= MSMg01no379_c19.b1 MSMg01no379_c19.b1 CHROMAT_FILE:
MSMg01no379_c19.b1 PHD_FILE: MSMg01no379_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:52 2005
         (659 letters)



>mm_chr4_16324667_16325726
          Length = 1060

 Score =  895 bits (463), Expect = 0.0
 Identities = 469/471 (99%), Gaps = 1/471 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcct-ccctgtctcattattgctgcaatttattgttctcaaaaatgctgcataacg 63
           |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gaattcctcccctgcctcattattgctgcaatttattgttctcaaaaatgctgcataacg 616

                                                                       
Query: 64  aacctaatggatagtaatttctagggtcacaccctccatctggtaatgtcccatggggcc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aacctaatggatagtaatttctagggtcacaccctccatctggtaatgtcccatggggcc 556

                                                                       
Query: 124 agacactgaaaggaatctctctgtacttccacccatcactcacttcctcaggatacccca 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agacactgaaaggaatctctctgtacttccacccatcactcacttcctcaggatacccca 496

                                                                       
Query: 184 gataaggctacacccatatcagttgtaaatacctcaagaaatataggatatatgtctttc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gataaggctacacccatatcagttgtaaatacctcaagaaatataggatatatgtctttc 436

                                                                       
Query: 244 ttttaactgcagctagaagagggttcatgtccttaattcccttcccagagcagggaagga 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttttaactgcagctagaagagggttcatgtccttaattcccttcccagagcagggaagga 376

                                                                       
Query: 304 atgctgaaattgaattcctgtaaaggtccctaccatctccactcatcacactgagttttc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atgctgaaattgaattcctgtaaaggtccctaccatctccactcatcacactgagttttc 316

                                                                       
Query: 364 tttgcgtttgaatggatgcactcaggttagacataggcagctatgcagactgctctctaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tttgcgtttgaatggatgcactcaggttagacataggcagctatgcagactgctctctaa 256

                                                              
Query: 424 tgtcagtgatttgcagactactgaactctccattcagaagcataaagtctt 474
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgtcagtgatttgcagactactgaactctccattcagaagcataaagtctt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space:   681450
Effective search space used:   681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)