Query= MSMg01no379_j18.b1 MSMg01no379_j18.b1 CHROMAT_FILE:
MSMg01no379_j18.b1 PHD_FILE: MSMg01no379_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:25 2005
(428 letters)
>mm_chr4_41197194_41198021
Length = 828
Score = 781 bits (404), Expect = 0.0
Identities = 419/424 (98%)
Strand = Plus / Minus
Query: 5 gaattccttatttctctgattaagtttcttggatgctggagttccagaagtggactactt 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaattccttattcctctgattaagtttcttggatgctggagttccagaagtggactactt 506
Query: 65 cagctgactttgataatttattgtattaatgatattggggttggttttaccaatgagcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagctgactttgataatttattgtattaatgatattggggttggttttaccaatgagcta 446
Query: 125 tatcccttgtctttttctggaactttgtgtaattcatactgaagtattctgttaggtttt 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 tatcccttgtctttttctggaactttgtgtaactcatactgaagtattctgttaggtttt 386
Query: 185 ggtacagagtagattttttaatataatttctgtgttaaattggatctaaaattagttttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtacagagtagattttttaatataatttctgtgttaaattggatctaaaattagttttg 326
Query: 245 tatcttgctgctgttagcagataaatagcttttgtttgagtgtttaccctaagtcttttt 304
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 tatcttgctgctgttagcagataaatagctgctgtttgagtgtttaccctaagtcttttt 266
Query: 305 actcttacatgtggtcttcacagctgatcaagaaggactgctatgccaagagttgtggca 364
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 actcttacatgtggtcttcacagctgatcaagaagaactgctatgccaagagttgtggca 206
Query: 365 caagcagagaggcaggcagatttctgagtttgaggccagccagaacagaacaacatagga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 caagcagagaggcaggcagatttctgagtttgaggccagccagaacagaacaacatagga 146
Query: 425 gact 428
||||
Sbjct: 145 gact 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_j18.g1 MSMg01no379_j18.g1 CHROMAT_FILE:
MSMg01no379_j18.g1 PHD_FILE: MSMg01no379_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:25 2005
(340 letters)
>mm_chr4_41058107_41058844
Length = 738
Score = 600 bits (310), Expect = e-176
Identities = 332/340 (97%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 1 tttgtgttgaatacaaaaccaaaccctatgcacacacaggcacaggcatgtagatgtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtgttgaatacaaaaccaaaccctatgcacacacaggcacaggcatgtagatgtgtg 260
Query: 61 catatacgtccctagcgcatatggaacagagacatcacgccatgatcagactgccctagc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 261 catatacgtccctagcgcatataaaacagagacatcacgccatgatcagactgccctatc 320
Query: 121 tatgtccacgtgcaataaggaacatggagaggcaggtgcccccatgggggtgcacctgca 180
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgtccacgtgcaatgaggaacaaggagaggcaggtgcccccatgggggtgcacctgca 380
Query: 181 acaccatctctagcacatatctacaaggttttctcaagagttttttcccctttctccctt 240
||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 381 acaccatctctagcacatatctacaaggttttctc--gagttttctcccctttctccctt 438
Query: 241 ctctcacttctttcttcttctctcttcccggttctagctcctatctccaaccctcaatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctctcacttctttcttcttctctcttcccggttctagctcctatctccaaccctcaatca 498
Query: 301 aaacctgaatagctggaagctggagagatggctcagtggt 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaacctgaatagctggaagctggagagatggctcagtggt 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 738
Length adjustment: 9
Effective length of query: 331
Effective length of database: 729
Effective search space: 241299
Effective search space used: 241299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
