XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCCTCTGAAGAACAGACTGGGAGGAAGAAGCAGCTCATTATGAGAAAAAA
GGGTACCAGCCAGGTAAAGTGCTAGCTAATCAGTTAAGGAAGCCAAAAGC
GGCTGGCGAAGGCCAGTTTGCTGATTGGCCTCAGGGCAGTCGGCTTCAAG
GTCCGCCCTATGCGGAGTCCCCGCCCTGCGTAGTGCGTCAGCCCTGCGCA
GAGAGGCAGTGCGCAGAGAGGCAGTGCGCAGACTCATTCATTCCCAGAGA
GGAACAAAGGAAAATACAACAGGCATTTCCAGTCTTTGAAGGAGCCGAGG
GTGGGCGTGTCCACGCTCCGGTAGAATACGTACAGATTAAAGAACTTGCC
GAGTCGGTCCGTAAATACGGAACCAATGCTAATTTTACCTTGGTGCAGTT
AGACAGGCTCGCCGGCATGGCACTAACTCCTGCCGACTGGCAAACGGTTG
TAAAAGCCGCTCTCCCTAGTATGGGCAAATATATGGAATGGAGAGCTCTT
TGGCATGAAGCTGCACAAGCGCAGGCCCGAGCAAACGCAGCTGTTTTGAC
TCCAGAGCACAGAGATTGGACTTTTGACTTGTTAACGGGTCAGGGAGTTT
ATTCTGTTGATCAAACAAATATCTTTGGGGAGGTTATGTCCGAATTTTTT
CCCCGGTAATAAAGGCCTGGAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTCATCAGAATCCAATGACAAGATAAATTCAAA
TTTACTAACATATTCTTCATGCTCATTTCTACCCCCATCTCCCATGTATC
AAACACAACTATCAGTCTCTACAGATATATTTCTCTGTACATTTTATATA
AGCAACACCATATTCTTAATATTCTCAATGTAATATACTGGTTTAATGTG
TTCTAAATCACAAACTGTCTATATTTTACTCTTTTTCAGTGCTGAGTACT
TCTCCACATTATGGATTTTCACTATATATTTGCTGCCACTTTTGTTTAGA
AAGGTGTTATGCACAAATGCAATGTCTTTAGAAACTATGAAGCCATTCAG
GCTTCTCATTACCTCTTGTGTATAAATAATGGATCTCAGGAGACTCAGGA
GTGCATGTCTGAGGTCGCTTTATTCAAAAGAAACTTAACACCTATATTTA
GAAACATTTGTAATTGTATCGGTGGTTAAGTAATCAATGTATAAATTGTA
CTCCAGAGAGTTATTAACAGTTTATAATGACATCAATTTATAAACATATA
TTTCACCTCCGTACCAAANGCATGTATGCCTATGCTTCCCATTTTTAGCC
TTATACTGGTTATTTGCATTGTAAAAATAAAAGTGAGGGAAAAAATTTCA
TTTATCCCCCCGCAGTCTTCTCCAAATTTGTAGGAAAAACCTACTTCTCC
CAAGCTAAATGGCCGAGGAAGAAATT

Query= MSMg01no381_m18.g1 MSMg01no381_m18.g1 CHROMAT_FILE:
MSMg01no381_m18.g1 PHD_FILE: MSMg01no381_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:19 2005
         (482 letters)



>mm_chr4_36889306_36890187
          Length = 882

 Score =  855 bits (442), Expect = 0.0
 Identities = 472/482 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcatcagaatccaatgacaagataaattcaaatttactaacatattcttcatgctcatt 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatcacaatccaatgacaagataaattcaaatttactaacatattcttcatgctcatt 260

                                                                       
Query: 61  tctacccccatctcccatgtatcaaacacaactatcagtctctacagatatatttctctg 120
           ||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctactcctatctcccatgtgtcaaacacaactatcagtctctacagatatatttctctg 320

                                                                       
Query: 121 tacattttatataagcaacaccatattcttaatattctcaatgtaatatactggtttaat 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tacattttatataagcaacaccatattcttaatattttcaatgtaatatactggtttaat 380

                                                                       
Query: 181 gtgttctaaatcacaaactgtctatattttactctttttcagtgctgagtacttctccac 240
           || ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttttctaaatcacaagctgactatattttactctttttcagtgctgagtacttctccac 440

                                                                       
Query: 241 attatggattttcactatatatttgctgccacttttgtttagaaaggtgttatgcacaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attatggattttcactatatatttgctgccacttttgtttagaaaggtgttatgcacaaa 500

                                                                       
Query: 301 tgcaatgtctttagaaactatgaagccattcaggcttctcattacctcttgtgtataaat 360
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 tgcaatgtctttagaaactatgaagccattcagggttctcattacctcttgtgtataaat 560

                                                                       
Query: 361 aatggatctcaggagactcaggagtgcatgtctgaggtcgctttattcaaaagaaactta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatggatctcaggagactcaggagtgcatgtctgaggtcgctttattcaaaagaaactta 620

                                                                       
Query: 421 acacctatatttagaaacatttgtaattgtatcggtggttaagtaatcaatgtataaatt 480
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaccaatatttagaaacatttgtaattgtatcggtggttaagtaatcaatgtataaatt 680

             
Query: 481 gt 482
           ||
Sbjct: 681 gt 682


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space:   411584
Effective search space used:   411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)