Query= MSMg01no383_d08.b1 MSMg01no383_d08.b1 CHROMAT_FILE:
MSMg01no383_d08.b1 PHD_FILE: MSMg01no383_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:12 2005
(467 letters)
>mm_chr4_110150398_110151266
Length = 869
Score = 851 bits (440), Expect = 0.0
Identities = 462/476 (97%), Gaps = 13/476 (2%)
Strand = Plus / Plus
Query: 5 gaattctaatcattgcacaatcacagagactatctacacatgtcaaattcatgccctgct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattctaatcattgcacaatcacagagactatctacacatgtcaaattcatgccctgct 260
Query: 65 agagcacaaggcaaaccacagtcagctgctttggacagtctgaagtagccccaaattcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagcacaaggcaaaccacagtcagctgctttggacagtctgaagtagccccaaattcca 320
Query: 125 caccttgaattaaaacagaaacattcttaaaatatttctgtttttt----ttttttttaa 180
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 caccttgaattaaaacagaaacattcttaaaatatttctgtttttttttcttttttttaa 380
Query: 181 gaaaccaaaactctaaaattgtcgctacaattcaatctcctgaacatagcttagatttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaccaaaactctaaaattgtcgctacaattcaatctcctgaacatagcttagatttca 440
Query: 241 gtagcgatgcaagatagctttaaatctaaatatagaacaaccttggaaagtgatttaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtagcgatgcaagatagctttaaatctaaatatagaacaaccttggaaagtgatttaact 500
Query: 301 attctatttctcattactagaggtcccaatgttagtgtgtgatagagataagatttcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attctatttctcattactagaggtcccaatgttagtgtgtgatagagataagatttcaaa 560
Query: 361 ttaacttcaaattacatcaaattattagatttctattgcaaaatacacttagataatctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaacttcaaattacatcaaattattagatttctattgcaaaatacacttagataatctg 620
Query: 421 ttcaatattagtactttctcttt------gttttttttttttt---gaaaaggcaa 467
||||||||||||||||||||||| |||||||||||||| ||| ||||||
Sbjct: 621 ttcaatattagtactttctctttctctttgttttttttttttttttgaataggcaa 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 869
Length adjustment: 10
Effective length of query: 457
Effective length of database: 859
Effective search space: 392563
Effective search space used: 392563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_d08.g1 MSMg01no383_d08.g1 CHROMAT_FILE:
MSMg01no383_d08.g1 PHD_FILE: MSMg01no383_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:12 2005
(496 letters)
>mm_chr4_110335744_110336639
Length = 896
Score = 723 bits (374), Expect = 0.0
Identities = 392/398 (98%), Gaps = 1/398 (0%)
Strand = Plus / Minus
Query: 1 acatctgatactataatcctggtcaaaagcctgtagctgggtaatacaggcatcaggcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 acatctgatactataatcctggtcaaaagcctgtagctgggtaatacaggcatcaggcta 339
Query: 61 acaaggcttccctagcgctatccacaggattgggaaaacagagacagagacttttttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 acaaggcttccctagcgctatccacaggattgggaaaacagagacagagacttttttgct 279
Query: 121 tttacatacctaaatcaattattttacatcctaattattgccccctccgtttcaacccct 180
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 278 tttacatacctaaatcaattattttacatcctaattactgccccctccttttcaacccct 219
Query: 181 cacagagtcctttccccatctgagag-tttctcccctggatacacccccaccctggcaca 239
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 218 cacagagtcctttccccatctgagagcgttctcccctggatatacccccaccctggcaca 159
Query: 240 tggagtctctgtcagattaggaacatcctctccccctgaggccagactaggcaatcctgt 299
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tgaagtctctgtcagattaggaacatcctctccccctgaggccagactaggcaatcctgt 99
Query: 300 tggatttcacagataggcaacagctttagggacagtccccactccagttgttgagggacc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 tggatttcacagataggcaacagctttagggacagtccccactccagttgttgagggacc 39
Query: 360 cacatggatactgagctgcacatctgctacttatgtgc 397
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 cacatggatactgagctgcacatctgctacttatgtgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
