Query= MSMg01no384_a23.b1 MSMg01no384_a23.b1 CHROMAT_FILE:
MSMg01no384_a23.b1 PHD_FILE: MSMg01no384_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:16 2005
(507 letters)
>mm_chr4_149125773_149126679
Length = 907
Score = 930 bits (481), Expect = 0.0
Identities = 496/501 (99%)
Strand = Plus / Plus
Query: 7 gaattcatttcaattggtttctatttccttaaaacctgtctctagacaagggtaataggc 66
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 207 gaattcatttcaattggtttctatttccttaaaacctggctctagacaagggtaataggc 266
Query: 67 ctaggcctggggaggcttgagacagcaagactgtaaatttgaagcagcctgaactacaca 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctaggcctggggaggcttgagacagcaagactgtaaatttgaagcagcctgaactacaca 326
Query: 127 gcaagaccctgtctcaacaaaaaacaaagtccaaacattttgtaggttccaccagaatac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gcaagaccctgtctcaacaaaaaacaaagtccaaacattttgtaggttccaccagaatac 386
Query: 187 tcaaggaacacaagaactccaggttagattcaggacagacacctgagacatcgggggcta 246
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 387 tcaaggaacacaagaactccaggttagattcaggacagacaccagagacatcggggacta 446
Query: 247 ggtccaaagtgccctagctggtgtcctggctggacagccaggcctctgcggagtttacag 306
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ggtccaaagtgccctcgctggtgtcctggctggacagccaggcctctgcggagtttacag 506
Query: 307 catccctcctgacagtggggctccacaaagaaccccagagaggaacacccaggaaggaag 366
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 507 catccctcctgacagtggggctccacaaagagccccagagaggaacacccaggaaggaag 566
Query: 367 ctgggaccatggagaggcccttctgtccatcttcccttgctctctggggctcctccccca 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctgggaccatggagaggcccttctgtccatcttcccttgctctctggggctcctccccca 626
Query: 427 caatgctgtcaggatagatctcaaatgacatttctgcatatgcatacagggctcctattt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 caatgctgtcaggatagatctcaaatgacatttctgcatatgcatacagggctcctattt 686
Query: 487 cccgtccacagcacagcagga 507
|||||||||||||||||||||
Sbjct: 687 cccgtccacagcacagcagga 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_a23.g1 MSMg01no384_a23.g1 CHROMAT_FILE:
MSMg01no384_a23.g1 PHD_FILE: MSMg01no384_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:16 2005
(195 letters)
>mm_chr4_149310322_149310916
Length = 595
Score = 265 bits (137), Expect = 1e-75
Identities = 164/173 (94%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 1 ctctcagagtatctggtcacagttcctggggtttct-agacctcctctcttccctcttcc 59
|||||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||
Sbjct: 334 ctctcagagtatctggtcacagttcctgggatttctaag-cctcttctcttccctcttcc 276
Query: 60 tctagtttccattctgttttgtggagttatattagatctttatttatccctccccagaca 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tctagtttccatcctgttttgtggagttatattagatctttatttatccctccccagaca 216
Query: 120 atttcaacttggtgggagagagagagagagagagagagagagagagagagaga 172
||||||||||||||||||||| ||||| ||||| ||| |||||||||||||||
Sbjct: 215 atttcaacttggtgggagagaaagagacagagacagacagagagagagagaga 163
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 86
Number of extensions: 33
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
