XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAAGGAT
TTACAAACCCAAAACTCAACTAATTGGGGCTGAGTCTGTAGTCTAAGGTA
TAATCGTGCTTCCTCACAACATTGGATGGTAGAAGAGTAGGATCATAGGA
ATAAGTCTTTCCATACATTACTAAGGACCAGTTCACTGGCTGCATCCCAA
GCCTACAGTCAGCACCCTGCCTCTGAGGTGGACTCAACACACCAGCCCTT
AGATTCTAGGTATACCCAACACAGCATACACCCCTGGAACCAGGCTAGAG
AATGACATCCAACGGTGCCAGCACAGCGGGAGGGAGGGAGGCAGGCCTCT
TGGAGCATTCCTAGCAGCTTGGCTTCCAAAGAGCAAAACTGAAGGATGGA
ACAAAGCCTCCTCAGGCTTGCATAAGCTTCCCAGAGGTGCTCAGAGGAAG
GCGCACTATGCAGACAGAGATTCTGAAGGATCTTCTATCAATCCTGATAC
ATTTTGACCTCATGGGGACTACAAGAGAAAGAGTCTTTTTTAATGTCCTA
CCCATATCTGCCCTCTCCTTATTAGAGGTGACAAGCCAAGCTAAAGGCAT
AAGCAGGGATAAAGGGCTCCCAAAAAGGGTTCCTAGGTTCATTCTTTCTT
GATGGAGGGGCTTCTGGAATTGAAGTGTGTGTGTTCTGGCCGACCGTTCC
TCGGATTATTCTTCTTGTGTGGCCTGTGGTGGAGGGCCCTTCTCATTAAG
TTTTCCTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTCACCTGAGGAATACCAAATGGCAGAGAAGCACCTGA
AAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATAAAACAACCT
TGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGT
GACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTG
TTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGT
TCCTCAGAAAATTGGACATAGTACTACAAGAGGATCCTGCAATACCTCTC
CTGGGCATATATCCAGAAGATGTCCCAACCATTAATAAGGACACATGCTC
CACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAAC
CAAGATGCCCCTAAACAGAGAAATGGATACAGAAAATGTGGTACATTTAC
ACAATGGAGTGTACTCAGCTATAAAAAACAATGAATTTATGAAATTCCTA
GGCAAATGGATGGATCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATC
ACAAAGGAACTCACACAATACATACTTCACTTGATAAGTGGATATTAGCT
CAGAAATGTAGGATACCCCAGATATTAGATACAATTTGCTAAACCCATTG
AAGTTCTCAAGAATGAAGACCCAAGGGTGGACACTTTTGCCATT

Query= MSMg01no384_i09.b1 MSMg01no384_i09.b1 CHROMAT_FILE:
MSMg01no384_i09.b1 PHD_FILE: MSMg01no384_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:50 2005
         (539 letters)



>mm_chr4_87229043_87229981
          Length = 939

 Score =  949 bits (491), Expect = 0.0
 Identities = 524/535 (97%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaaggatttacaaacccaaaactcaactaattggggctgagtctgtagtctaag 64
           ||||||||||||  || |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gaattccaaggaaataaaaactcaaaactcaactaattggggctgagtctgtagtctaag 680

                                                                       
Query: 65  gtataatcgtgcttcctcacaacattggatggtagaagagtaggatcataggaataagtc 124
           |||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||
Sbjct: 679 gtataatcgtgcttcctcacaacactggatggtagaagagtagggtcacaggaataagtc 620

                                                                       
Query: 125 tttccatacattactaaggaccagttcactggctgcatcccaagcctacagtcagcaccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tttccatacattactaaggaccagttcactggctgcatcccaagcctacagtcagcaccc 560

                                                                       
Query: 185 tgcctctgaggtggactcaacacaccagcccttagattctaggtatacccaacacagcat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgcctctgaggtggactcaacacaccagcccttagattctaggtatacccaacacagcat 500

                                                                       
Query: 245 acacccctggaaccaggctagagaatgacatccaacggtgccagcacagcgggagggagg 304
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 499 acacccctggaaccaggctagagaatgacatccaaaggtgccagcacagcgggagggagg 440

                                                                       
Query: 305 gaggcaggcctcttggagcattcctagcagcttggcttccaaagagcaaaactgaaggat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gaggcaggcctcttggagcattcctagcagcttggcttccaaagagcaaaactgaaggat 380

                                                                       
Query: 365 ggaacaaagcctcctcaggcttgcataagcttcccagaggtgctcagaggaaggcgcact 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 379 ggaacaaagcctcctcaggcttgcataagcttcccagaggtgctcagaggaaggcacact 320

                                                                       
Query: 425 atgcagacagagattctgaaggatcttctatcaatcctgatacattttgacctcatgggg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atgcagacagagattctgaaggatcttctatcaatcctgatacattttgacctcatgggg 260

                                                                  
Query: 485 actacaagagaaagagtcttttttaatgtcctacccatatctgccctctccttat 539
           ||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 259 actacaagagaaagagtcttttttaatgtcctacccatacccgccctctccttat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space:   491441
Effective search space used:   491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)