Query= MSMg01no387_g22.b1 MSMg01no387_g22.b1 CHROMAT_FILE:
MSMg01no387_g22.b1 PHD_FILE: MSMg01no387_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:29 2005
(418 letters)
>mm_chr4_142768803_142769620
Length = 818
Score = 801 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Minus
Query: 5 gaattcagttactttgctgttaagcaacctagctttttaattgtattgtaaaactgaatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gaattcagttactttgctgttaagcaacctagctttttaattgtattgtaaaactgaatg 559
Query: 65 acattaatgctttcgatatttaaaataaccacattacattataaaaatactggttttatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 acattaatgctttcgatatttaaaataaccacattacattataaaaatactggttttatt 499
Query: 125 ttctaggtgtctgggccactaaaccaattttaaaagggaaaaagtttgggccatttgttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttctaggtgtctgggccactaaaccaattttaaaagggaaaaagtttgggccatttgttg 439
Query: 185 gtgataagaagaagagatcccaggttaggaataatgtatacatgtgggaggtaagagagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtgataagaagaagagatcccaggttaggaataatgtatacatgtgggaggtaagagagt 379
Query: 245 ttcaagcactttcaagagcccactccctgttttcacaggatctgatgggttaaagttaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttcaagcactttcaagagcccactccctgttttcacaggatctgatgggttaaagttaaa 319
Query: 305 acagtaatttcaatgtgttctttaaaagtttttcgttaaagagaaaatgacttttctggg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acagtaatttcaatgtgttctttaaaagtttttcgttaaagagaaaatgacttttctggg 259
Query: 365 tagactgttgtttgcatgtctgtgtagtttgaagctgccccattgtctttgatg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tagactgttgtttgcatgtctgtgtagtttgaagctgccccattgtctttgatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_g22.g1 MSMg01no387_g22.g1 CHROMAT_FILE:
MSMg01no387_g22.g1 PHD_FILE: MSMg01no387_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:29 2005
(304 letters)
>mm_chr4_142683736_142684439
Length = 704
Score = 532 bits (275), Expect = e-155
Identities = 301/321 (93%), Gaps = 18/321 (5%)
Strand = Plus / Plus
Query: 1 ctgtttgtcatggattctgtgcagtttgtcatggcatcccacagactacagggtccaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtttgtcatggattctgtgcagtttgtcatggcatcccacagactacagggtccaggg 260
Query: 61 taaatgttgtccaacaaagcatcagaagtggatgctgaggtaagaaggaactggctggac 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 taaatgttgtccaacaaagcatcagaagtggatgttgaggtaagaaggaactggctggac 320
Query: 121 catctggcaaagcagatgtttaaacactcaggagctgatgtatgtgtcctgttgtaacag 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catctggcaaagcagctgtttaaacactcaggagctgatgtatgtgtcctgttgtaacag 380
Query: 181 gacagggtgaggagaaacaggaggcttagagacaaggaaaagcatcctgtttgtagggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagggtgaggagaaacaggaggcttagagacaaggaaaagcatcctgtttgtagggac 440
Query: 241 aagagcagggattttagtggtggcagcaattcatatat------------------gtgt 282
|||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 aagagcagggattttagtggtggcagcaattcatatatatatatatatatatatatgtgt 500
Query: 283 gtgtgtgtgtgtgtgtgtgtg 303
|||||||||||||||||||||
Sbjct: 501 gtgtgtgtgtgtgtgtgtgtg 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
