TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTGTTCTTGTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTG
GAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCTGTC
CGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTG
CCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCCTTTGCCAACTTTTTCA
TCGCAGCGCTCCCCCTTTTATCGATTCCTCCCCGGGCCCCCCTTCCCCTC
CTCCCCCTCCTCTCCCCCCCTATTTTGGCCCGGCCGTTCTTTTCTTCCCT
TCCCGCCGCCCGCCCTATCCCCCTCCCCCTCCTTCTGTTTCTTTTCCCCC
ACCCCCTCCGCCCACCTCCCTCTCTTCCTTTTCCTCCTTCCCCTTTTCGC
CCCCTCCCCTCTCCCCCCCCTAATTTCCTCTCCTCTCCCCCTCCCCCCCC
CCCTCTCTTTCCCCCTCCCCTCTTAACTTCTTCTCCCCCCCCCCCCCCCT
TCCCTTTTCCCCCCTCCCCCTTCCCCCTTCCCCCCCCTTCTCCCCCTTCC
CCCCCGTCCCCCCCTTTCCCCCCCTCCCCTTTTCTTCTTTTCCCTTTTTN
NNCCCCGGCGTGCCCTTGTGCCTTCGTTTNCCTTCCCTCCCTTTNNNNCT
CGCCGGCGCTCTCTNCNCCNCNNNNNCCACGGGTNNNNNNTGGGNNNNNN
NNNNNNNNNNNNNNNCCCNCCGGGGNNNNNNNNNTTGGGGNNNNNNNNNT
TGGNNTNNANNNTTNNNN

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAACCCAACAGCATATTATTTCATA
AAGAATCCCATCTCTCAGACTGAATCAAAAGTAAATGGCAAGAAAAAATA
TCAAAAGAGAAAATAAAACTTGGCAGTCTTTTTAAAGGAAAAGGCAAATA
AACCAAGAAATAAAACCAGGAAGAGAGAGTTTTTTCTGTTGGATTCTGTA
GTAAAGACAGTTATATGGCAGCCTGGAAGTAGGAATGAGGCAAACCATTA
CTAATCTGCTTGGATGGATATTTGTGGATGAATGGTTACAGCCAGGGTCA
TACGTTATTAAATTGGGTATCTGAATCTAATAAATATAACAAATCATTTT
CTTTTCATGACCAGGTTTTAGTGTTAGAACTAAAAATAATTCTATTAACA
TACTGCAGAAAACCAAACAAATGTAAATAACATGTTAGTGAAACATATAC
TGATTGAAGAATTCTCAGAAATTGAACACTGTAAACTATAATTTCTGATA
CTGTAATATACAGGATGACTTAAGTTCTTATCACACCACATCATTTCCTG
AGAAACTTTGCAGGAGACTCATTTTCCTTTTTACTTACTGAGGAAAATAT
TATGTTGCTTGAGAGACTTTACCCAAAAGGAAAAAAAATCTTACTTTCCA
CCCAAATGACTCCCCCATTGAGGAGGAGTTAAAGAATTCCCGAAAGCTGT
TTTATGGAAATTTAAATAACCCTTATACG

Query= MSMg01no387_o13.g1 MSMg01no387_o13.g1 CHROMAT_FILE:
MSMg01no387_o13.g1 PHD_FILE: MSMg01no387_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:06 2005
         (434 letters)



>mm_chr4_27911075_27911908
          Length = 834

 Score =  835 bits (432), Expect = 0.0
 Identities = 432/432 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacccaacagcatattatttcataaagaatcccatctctcagactgaatcaaaagtaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 aacccaacagcatattatttcataaagaatcccatctctcagactgaatcaaaagtaaat 573

                                                                       
Query: 61  ggcaagaaaaaatatcaaaagagaaaataaaacttggcagtctttttaaaggaaaaggca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggcaagaaaaaatatcaaaagagaaaataaaacttggcagtctttttaaaggaaaaggca 513

                                                                       
Query: 121 aataaaccaagaaataaaaccaggaagagagagttttttctgttggattctgtagtaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aataaaccaagaaataaaaccaggaagagagagttttttctgttggattctgtagtaaag 453

                                                                       
Query: 181 acagttatatggcagcctggaagtaggaatgaggcaaaccattactaatctgcttggatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 acagttatatggcagcctggaagtaggaatgaggcaaaccattactaatctgcttggatg 393

                                                                       
Query: 241 gatatttgtggatgaatggttacagccagggtcatacgttattaaattgggtatctgaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gatatttgtggatgaatggttacagccagggtcatacgttattaaattgggtatctgaat 333

                                                                       
Query: 301 ctaataaatataacaaatcattttcttttcatgaccaggttttagtgttagaactaaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctaataaatataacaaatcattttcttttcatgaccaggttttagtgttagaactaaaaa 273

                                                                       
Query: 361 taattctattaacatactgcagaaaaccaaacaaatgtaaataacatgttagtgaaacat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 taattctattaacatactgcagaaaaccaaacaaatgtaaataacatgttagtgaaacat 213

                       
Query: 421 atactgattgaa 432
           ||||||||||||
Sbjct: 212 atactgattgaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space:   350625
Effective search space used:   350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)