NNNNCCCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTGTAGACTTATATAGCACAAGTGGGAAGTAACCCTATA
GCTATAATTCAGGGAGGATTTGTGGATGGCTTCCACAGCAATAACCTCAC
CTAGACAGAAGTGGGCACTTCAAGCTCCTGACTTCCAGGCATACAGTGGG
ACCGCATGTCCCTGTGCCCTTTTAAGCCATAAGTCATGTGACTCATATCA
GTCACTAATCTGTGAATTCAATAATGTGCATCACACCTGGAAAAAGCTCT
TAAAGCTGGCATGAATTCATGATGCTATCTTTCTCCACCAAGATAGCATC
AGGCTTGCTGTTTATGATTCTGGAAGCACAATTCAAGATGAAACCATCTT
CAGACTAGTTAAACACATTAAGCAAAACCCTTCTGACCCTGAGCAAGAAG
TACATTTCTACATAAGCTACTGAGTTGTTTAGGTCTATTTGTTGTAGCAG
TATAACTGCCCTTGACCTGACTCGTTTAAAACATGATGTGGGATAACACA
ACAAGACTAATAAACATCCAAACATTCATCTAGACTGGACAATAGCTAGG
AACATAGACTGAAAGGATAGCGATCTCCTTAGCACACCTCCCCTGTCACA
ACTTACGAGACAGATTGTGATCCTGTCAGAGAAATCTCCCACCCGCCCCT
CCCCTGGTGGTAGGCGCCGCAACGGTGCCGG

NAAAANAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAACTGAGGAATATCA
AATGACTGAGAAGGACCTATAGAAATGTTCAACATCCTTAAACATCAGGG
AAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATG
GCTAAGATCAAAAACTCAGATGACAGCAGATGCTGGCAAAGTTATGGAGA
AAGAGGAACACTCCTCCATTGCTGGTGGGATTGCAAGCTGGTACAACCAC
TCTGGAAATCAGTTTGGCGGTTCCTCAAAAAATTAGACATAGTACTACTG
GAGGACCCAGCAATACCACTCCTGAGCATATACTCAGAAGATGCTCCAAT
ATGTAATAAGGACACATGTTCCACTATTTTCATAGCAGCCTTATTTATAA
TAGCCAGGAGCTGAAAACAACCCAGATGTCCATCAACAGAGGAATATCCA
GAAAATGTGATATATTTACACAATGGAGTACTAGTCAGCTATTAAAAACA
ATGAATTTATGAAATTCTTAGGCAAATGGATGGAACTAGAANATATCATC
CTGAGGTAACCCAGTCACAAAAGCACACACGATATACACTAACTGATAAG
TGGATATTAGCCCAGAGGCTCAGAATACCCAAGATATATTTAATAAACTA
CATGAAACTCAAGAAGAAGGGAGACCACAGTGTGAATACTTT

Query= MSMg01no390_d16.b1 MSMg01no390_d16.b1 CHROMAT_FILE:
MSMg01no390_d16.b1 PHD_FILE: MSMg01no390_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:04 2005
         (536 letters)



>mm_chr4_94723017_94723952
          Length = 936

 Score =  934 bits (483), Expect = 0.0
 Identities = 483/483 (100%)
 Strand = Plus / Minus

                                                                       
Query: 54  cagcaataacctcacctagacagaagtgggcacttcaagctcctgacttccaggcataca 113
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 cagcaataacctcacctagacagaagtgggcacttcaagctcctgacttccaggcataca 877

                                                                       
Query: 114 gtgggaccgcatgtccctgtgcccttttaagccataagtcatgtgactcatatcagtcac 173
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gtgggaccgcatgtccctgtgcccttttaagccataagtcatgtgactcatatcagtcac 817

                                                                       
Query: 174 taatctgtgaattcaataatgtgcatcacacctggaaaaagctcttaaagctggcatgaa 233
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 taatctgtgaattcaataatgtgcatcacacctggaaaaagctcttaaagctggcatgaa 757

                                                                       
Query: 234 ttcatgatgctatctttctccaccaagatagcatcaggcttgctgtttatgattctggaa 293
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ttcatgatgctatctttctccaccaagatagcatcaggcttgctgtttatgattctggaa 697

                                                                       
Query: 294 gcacaattcaagatgaaaccatcttcagactagttaaacacattaagcaaaacccttctg 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gcacaattcaagatgaaaccatcttcagactagttaaacacattaagcaaaacccttctg 637

                                                                       
Query: 354 accctgagcaagaagtacatttctacataagctactgagttgtttaggtctatttgttgt 413
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 accctgagcaagaagtacatttctacataagctactgagttgtttaggtctatttgttgt 577

                                                                       
Query: 414 agcagtataactgcccttgacctgactcgtttaaaacatgatgtgggataacacaacaag 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 agcagtataactgcccttgacctgactcgtttaaaacatgatgtgggataacacaacaag 517

                                                                       
Query: 474 actaataaacatccaaacattcatctagactggacaatagctaggaacatagactgaaag 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 actaataaacatccaaacattcatctagactggacaatagctaggaacatagactgaaag 457

              
Query: 534 gat 536
           |||
Sbjct: 456 gat 454


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)