Query= MSMg01no393_i09.b1 MSMg01no393_i09.b1 CHROMAT_FILE:
MSMg01no393_i09.b1 PHD_FILE: MSMg01no393_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:29 2005
(506 letters)
>mm_chr4_10102240_10103145
Length = 906
Score = 963 bits (498), Expect = 0.0
Identities = 504/506 (99%)
Strand = Plus / Minus
Query: 1 taaccattagtgatttaaatttagtgcaaagttaaaaaaaaatctaagtatagtctttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 taaccattagtgatttaaatttagtgcaaagttaaaaaaaaatctaagtatagtctttgt 647
Query: 61 tttcctctatatttcctaaagaaaaggtagagtgaatcacatgtaaataacatgggtaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tttcctctatatttcctaaagaaaaggtagagtgaatcacatgtaaataacatgggtaac 587
Query: 121 tttaaatggaataaataaataaaaactttaaatagaatatcatgggttattgttgcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tttaaatggaataaataaataaaaactttaaatagaatatcatgggttattgttgcaaga 527
Query: 181 gctctgaaataacacagatcatctctaaattaattgacatagaatgagcgtgagaagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gctctgaaataacacagatcatctctaaattaattgacatagaatgagcgtgagaagttc 467
Query: 241 cttcctggatgtttgggacactttttgttcttcacacaagccttttttgtctccctcctt 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 466 cttcctggatgtttgggacactttttgttcctcacacaagccttttttgtctccctcctt 407
Query: 301 tttttcccatcaacacagcaaaataatagcaggcaaaagacactgtgtttctgccctaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tttttcccatcaacacagcaaaataatagcaggcaaaagacactgtgtttctgccctaaa 347
Query: 361 tgtcttatgttcaaaatattcaaaagtaaaatcggatcagaaaagagctcaagttttgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tgtcttatgttcaaaatattcaaaagtaaaatcggatcagaaaagagctcaagttttgga 287
Query: 421 aggtgaagaacatttagagtatccaatgtctttctacaaaagctttttctttccttacga 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 286 aggtgaagaacatttagagtatccaatgtctttctataaaagctttttctttccttacga 227
Query: 481 gggcctttgataacctgccctggaaa 506
||||||||||||||||||||||||||
Sbjct: 226 gggcctttgataacctgccctggaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_i09.g1 MSMg01no393_i09.g1 CHROMAT_FILE:
MSMg01no393_i09.g1 PHD_FILE: MSMg01no393_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:29 2005
(452 letters)
>mm_chr4_9911693_9912544
Length = 852
Score = 859 bits (444), Expect = 0.0
Identities = 450/452 (99%)
Strand = Plus / Plus
Query: 1 ctctttcttagcaagaggcttctgagctctgtgctgccaagatagccagggacagaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctttcttagcaagaggcttctgagctctgtgctgccaagatagccagggacagaccca 260
Query: 61 ttggctagaattcagctatccattggctgttttgcagatggaggaccagccaacctgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggctagaattcagctatccattggctgttttgcagatggaggaccagccaacctgggg 320
Query: 121 ggttctgccctgcagcaaaactgggcacttggcgttgaaggagcagattgcctgattggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttctgccctgcagcaaaactgggcacttggcgttgaaggagcagattgcctgattggt 380
Query: 181 gcagcaaccagcccaaatgtggaagcagctatagaagcagggacagagggagatgactca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagcaaccagcccaaatgtggaagcagctatagaagcagggacagagggagatgactca 440
Query: 241 tggtagggtcagtgtgatggccagaagtttaacagagttagtggttccctgctcccaaag 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 tggtagggtcagtgtgatggccagaagtttaacagagttagtggttccatgctcccaaag 500
Query: 301 ggccatgggtcaacaggcacaagagtccatttctcccctgtgtatggatccagtttccaa 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 ggccatgggtcaacaggcacaagagtccatttctcccttgtgtatggatccagtttccaa 560
Query: 361 atatggcttcaggctgcataagacctgcttatgtagtcagatcaggatttgataatgaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atatggcttcaggctgcataagacctgcttatgtagtcagatcaggatttgataatgaga 620
Query: 421 gcagggtgacatgtctatgtaagaaacccaca 452
||||||||||||||||||||||||||||||||
Sbjct: 621 gcagggtgacatgtctatgtaagaaacccaca 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
