MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-394L17
Chromosome	4 (Build37)
Map Location	123,899,251 - 123,899,486
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Heyl, LOC194197, LOC622334, Pabpc4, Bmp8a, Oxct2a, Macf1, D830031N03Rik, LOC100039110, Ndufs5, 6330407G11Rik, Rhbdl2, LOC667064, Mycbp, Rragc
Downstream gene	1700057H15Rik, LOC100039332, Pou3f1, Utp11l, Fhl3, Sf3a3, LOC664991, Inpp5b, LOC100039433, Mtf1, Yrdc, Gm50, Epha10, Cdca8, 9930104L06Rik, Rspo1, Gnl2, Dnali1, Snip1, 2310005N01Rik, Zc3h12a
Link	Open Mouse BAC browser

Click to get alignment info.

name	Heyl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56198 MGI:1860511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC194197 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:194197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC622334 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622334
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	Pabpc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230721 MGI:2385206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Bmp8a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12163 MGI:104515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Oxct2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64059 MGI:1891061
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Macf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11426 MGI:108559
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 302 ESTs, 22 Proteins

name	D830031N03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:442834 MGI:3045367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein

name	LOC100039110 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ndufs5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:595136 MGI:1890889
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6330407G11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68050 MGI:1915300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhbdl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230726 MGI:3608413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667064 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins pseudo : _no_value

name	Mycbp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56309 MGI:1891750
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rragc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54170 MGI:1858751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700057H15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78460 MGI:1925710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100039332 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Pou3f1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18991 MGI:101896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Utp11l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67205 MGI:1914455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fhl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14201 MGI:1341092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sf3a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75062 MGI:1922312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664991 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664991
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Inpp5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16330 MGI:103257
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039433 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Mtf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17764 MGI:101786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Yrdc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230734 MGI:2387201
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm50 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215090 MGI:2684896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epha10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230735 MGI:3586824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdca8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52276 MGI:1196274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9930104L06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:194268 MGI:3041172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rspo1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:192199 MGI:2183426
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230737 MGI:2385207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnali1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75563 MGI:1922813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76793 MGI:2156003
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310005N01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70088 MGI:1917338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zc3h12a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230738 MGI:2385891
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Heyl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606342 GeneID:56198 MGI:1860511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hairy/enhancer-of-split related with YRPW motif-like transcript_id : NM_013905.3

name	Pabpc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34419621 GeneID:230721 MGI:2385206
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : poly A binding protein, cytoplasmic 4 transcript_id : NM_130881.2

name	Pabpc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130218 GeneID:230721 MGI:2385206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : poly A binding protein, cytoplasmic 4 transcript_id : NM_148917.2

name	Bmp8a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892640 GeneID:12163 MGI:104515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone morphogenetic protein 8a transcript_id : NM_007558.2

name	Oxct2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802949 GeneID:64059 MGI:1891061
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-oxoacid CoA transferase 2A transcript_id : NM_022033.2

name	Macf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253093 GeneID:11426 MGI:108559
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 257 ESTs, 14 Proteins product : microtubule-actin crosslinking factor 1 transcript_id : XM_001472723.1

name	Macf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253091 GeneID:11426 MGI:108559
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 259 ESTs, 15 Proteins product : microtubule-actin crosslinking factor 1 transcript_id : XM_001472697.1

name	Macf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253089 GeneID:11426 MGI:108559
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 282 ESTs, 14 Proteins product : microtubule-actin crosslinking factor 1 transcript_id : XM_001472676.1

name	Macf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253087 GeneID:11426 MGI:108559
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 287 ESTs, 16 Proteins product : microtubule-actin crosslinking factor 1, transcript variant 2 transcript_id : XM_884922.3

name	D830031N03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372485 GeneID:442834 MGI:3045367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein product : RIKEN cDNA D830031N03 gene transcript_id : XM_885053.2

name	LOC100039110 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253082 GeneID:100039110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to hCG2016250 transcript_id : XM_001472285.1

name	Ndufs5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:72004261 GeneID:595136 MGI:1890889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) Fe-S protein 5 transcript_id : NM_001030274.1

name	6330407G11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71892472 GeneID:68050 MGI:1915300
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330407G11 gene transcript_id : NM_023423.3

name	Rhbdl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723320 GeneID:230726 MGI:3608413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : rhomboid, veinlet-like 2 (Drosophila) transcript_id : NM_183163.2

name	Mycbp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801387 GeneID:56309 MGI:1891750
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : c-myc binding protein transcript_id : NM_019660.3

name	Rragc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145486 GeneID:54170 MGI:1858751
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras-related GTP binding C transcript_id : NM_017475.2

name	1700057H15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253085 GeneID:78460 MGI:1925710
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700057H15 gene transcript_id : XM_001472480.1

name	LOC100039332 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253097 GeneID:100039332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039332 transcript_id : XM_001472948.1

name	Pou3f1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7106382 GeneID:18991 MGI:101896
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 3, transcription factor 1 transcript_id : NM_011141.1

name	Utp11l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373827 GeneID:67205 MGI:1914455
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) transcript_id : NM_026031.2

name	Fhl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130488505 GeneID:14201 MGI:1341092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : four and a half LIM domains 3 transcript_id : NM_010213.2

name	Sf3a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249078 GeneID:75062 MGI:1922312
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor 3a, subunit 3 transcript_id : NM_029157.3

name	Inpp5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30231212 GeneID:16330 MGI:103257
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol polyphosphate-5-phosphatase B transcript_id : NM_008385.3

name	LOC100039433 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253101 GeneID:100039433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100039433 transcript_id : XM_001473153.1

name	Mtf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362528 GeneID:17764 MGI:101786
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : metal response element binding transcription factor 1 transcript_id : NM_008636.3

name	Yrdc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956353 GeneID:230734 MGI:2387201
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : yrdC domain containing (E.coli) transcript_id : NM_153566.1

name	Gm50 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56090559 GeneID:215090 MGI:2684896
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 50, (NCBI) transcript_id : NM_001007573.1

name	Epha10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364312 GeneID:230735 MGI:3586824
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Eph receptor A10 transcript_id : NM_177671.4

name	Cdca8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375934 GeneID:52276 MGI:1196274
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle associated 8 transcript_id : NM_026560.3

name	9930104L06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145556 GeneID:194268 MGI:3041172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9930104L06 gene transcript_id : NM_177573.3

name	Rspo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20149775 GeneID:192199 MGI:2183426
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : R-spondin homolog (Xenopus laevis) transcript_id : NM_138683.1

name	Gnl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704087 GeneID:230737 MGI:2385207
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanine nucleotide binding protein-like 2 (nucleolar) transcript_id : NM_145552.1

name	Dnali1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352308 GeneID:75563 MGI:1922813
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein, axonemal, light intermediate polypeptide 1 transcript_id : NM_175223.3

name	Snip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377792 GeneID:76793 MGI:2156003
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Smad nuclear interacting protein 1 transcript_id : NM_175246.3

name	2310005N01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371828 GeneID:70088 MGI:1917338
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310005N01 gene transcript_id : NM_027310.2

name	Zc3h12a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24233518 GeneID:230738 MGI:2385891
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger CCCH type containing 12A transcript_id : NM_153159.1

name	Heyl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560486 CCDS:CCDS18613.1 GeneID:56198 MGI:1860511
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 note : hairy and enhance of split related 3; hairy-related transcription factor 3 product : hairy/enhancer-of-split related with YRPW motif-like protein_id : NP_038933.2

name	Pabpc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34419622 CCDS:CCDS18614.1 GeneID:230721 MGI:2385206
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008143 - poly(A) binding [Evidence ISS]; GO:0017130 - poly(rC) binding [Evidence ISS]; GO:0008266 - poly(U) binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : poly(A) binding protein, cytoplasmic 4 isoform 1 protein_id : NP_570951.2

name	Pabpc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507391 CCDS:CCDS18615.1 GeneID:230721 MGI:2385206
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008143 - poly(A) binding [Evidence ISS]; GO:0017130 - poly(rC) binding [Evidence ISS]; GO:0008266 - poly(U) binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : poly(A) binding protein, cytoplasmic 4 isoform 2 protein_id : NP_683717.1

name	Bmp8a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671644 CCDS:CCDS18616.1 GeneID:12163 MGI:104515
definition	GO_function : GO:0005125 - cytokine activity [Evidence TAS]; GO:0008083 - growth factor activity [Evidence IEA] GO_process : GO:0051216 - cartilage development [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0040007 - growth [Evidence IEA]; GO:0001503 - ossification [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence TAS] codon_start : 1 note : osteogenic protein 2 product : bone morphogenetic protein 8a protein_id : NP_031584.1

name	Oxct2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11968160 CCDS:CCDS18617.1 GeneID:64059 MGI:1891061
definition	GO_component : GO:0005739 - mitochondrion [Evidence TAS] [Evidence IDA] GO_function : GO:0008260 - 3-oxoacid CoA-transferase activity [Evidence ISS]; GO:0008410 - CoA-transferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0006104 - succinyl-CoA metabolism [Evidence ISS] codon_start : 1 note : haploid germ cell specific succinyl CoA transferase; succinyl-CoA:3-oxoacid CoA-transferase product : 3-oxoacid CoA transferase 2A protein_id : NP_071316.1

name	Macf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253094 GeneID:11426 MGI:108559
definition	codon_start : 1 product : microtubule-actin crosslinking factor 1 protein_id : XP_001472773.1

name	Macf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253092 GeneID:11426 MGI:108559
definition	codon_start : 1 product : microtubule-actin crosslinking factor 1 protein_id : XP_001472747.1

name	Macf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253090 GeneID:11426 MGI:108559
definition	codon_start : 1 product : microtubule-actin crosslinking factor 1 protein_id : XP_001472726.1

name	Macf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253088 GeneID:11426 MGI:108559
definition	codon_start : 1 product : microtubule-actin crosslinking factor 1 isoform 2 protein_id : XP_890015.3

name	D830031N03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82895149 GeneID:442834 MGI:3045367
definition	codon_start : 1 product : similar to mKIAA0754 protein protein_id : XP_890146.1

name	LOC100039110 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253083 GeneID:100039110
definition	codon_start : 1 product : similar to hCG2016250 protein_id : XP_001472335.1

name	Ndufs5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:72004262 CCDS:CCDS18618.1 GeneID:595136 MGI:1890889
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : NADH dehydrogenase (ubiquinone) Fe-S protein 5 protein_id : NP_001025445.1

name	6330407G11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982645 CCDS:CCDS18619.1 GeneID:68050 MGI:1915300
definition	codon_start : 1 product : hypothetical protein LOC68050 protein_id : NP_075912.2

name	Rhbdl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723321 GeneID:230726 MGI:3608413
definition	codon_start : 1 product : rhomboid, veinlet-like 2 protein_id : NP_898986.2

name	Mycbp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84871978 CCDS:CCDS18621.1 GeneID:56309 MGI:1891750
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : c-myc binding protein protein_id : NP_062634.2

name	Rragc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114145487 CCDS:CCDS18622.1 GeneID:54170 MGI:1858751
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0019003 - GDP binding [Evidence ISS]; GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence ISS]; GO:0008289 - lipid binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence ISS] GO_process : GO:0006915 - apoptosis [Evidence ISS]; GO:0016049 - cell growth [Evidence ISS]; GO:0008380 - RNA splicing [Evidence ISS]; GO:0007264 - small GTPase mediated signal transduction [Evidence ISS]; GO:0006350 - transcription [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : small GTPase, homolog product : small GTPase homolog protein_id : NP_059503.2

name	1700057H15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253086 GeneID:78460 MGI:1925710
definition	codon_start : 1 product : hypothetical protein LOC78460 protein_id : XP_001472530.1

name	LOC100039332 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253098 GeneID:100039332
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472998.1

name	Pou3f1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106383 GeneID:18991 MGI:101896
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0042552 - myelination [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : octamer binding factor oct6 product : POU domain, class 3, transcription factor 1 protein_id : NP_035271.1

name	Utp11l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385534 CCDS:CCDS18623.1 GeneID:67205 MGI:1914455
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005615 - extracellular space [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] [Evidence ISS]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0048011 - nerve growth factor receptor signaling pathway [Evidence ISS]; GO:0007399 - nervous system development [Evidence ISS]; GO:0006364 - rRNA processing [Evidence IEA] codon_start : 1 note : novel protein similar to Cgi-94 product : UTP11-like, U3 small nucleolar ribonucleoprotein protein_id : NP_080307.1

name	Fhl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:130488506 GeneID:14201 MGI:1341092
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0001725 - stress fiber [Evidence IDA]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IDA] codon_start : 1 product : four and a half LIM domains 3 protein_id : NP_034343.2

name	Sf3a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22095003 GeneID:75062 MGI:1922312
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : splicing factor 3a, subunit 3 protein_id : NP_083433.1

name	Inpp5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30231213 GeneID:16330 MGI:103257
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004445 - inositol-polyphosphate 5-phosphatase activity [Evidence ISS] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : inositol polyphosphate-5-phosphatase, 75 kDa product : inositol polyphosphate-5-phosphatase B protein_id : NP_032411.3

name	LOC100039433 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253102 GeneID:100039433
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473203.1

name	Mtf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543269 CCDS:CCDS18627.1 GeneID:17764 MGI:101786
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA]; GO:0042156 - zinc-mediated transcriptional activator activity [Evidence IDA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : metalloregulatory transcription factor; thymic lymphoma susceptibility product : metal response element binding transcription factor 1 protein_id : NP_032662.2

name	Yrdc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956354 CCDS:CCDS18628.1 GeneID:230734 MGI:2387201
definition	GO_component : GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051051 - negative regulation of transport [Evidence ISS] codon_start : 1 exception : mismatches in translation product : yrdC domain containing protein_id : NP_705794.1

name	Gm50 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56090560 CCDS:CCDS18629.1 GeneID:215090 MGI:2684896
definition	codon_start : 1 note : novel protein similar to mannosidase, endo-alpha Manea product : hypothetical protein LOC215090 protein_id : NP_001007574.1

name	Epha10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626015 CCDS:CCDS18630.1 GeneID:230735 MGI:3586824
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005003 - ephrin receptor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 product : Eph receptor A10 protein_id : NP_808339.2

name	Cdca8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50878279 CCDS:CCDS18631.1 GeneID:52276 MGI:1196274
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0043234 - protein complex [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : embryonic stem cell-related protein_id : NP_080836.2

name	9930104L06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114145557 GeneID:194268 MGI:3041172
definition	codon_start : 1 product : hypothetical protein LOC194268 protein_id : NP_808241.2

name	Rspo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149776 CCDS:CCDS18633.1 GeneID:192199 MGI:2183426
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006118 - electron transport [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation note : thrombospondin type 1 domain containing gene Rspondin product : thrombospondin type 1 domain containing protein_id : NP_619624.1

name	Gnl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704088 CCDS:CCDS18634.1 GeneID:230737 MGI:2385207
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : testicular antigen product : guanine nucleotide binding protein-like 2 (nucleolar) protein_id : NP_663527.1

name	Dnali1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30172570 CCDS:CCDS18635.1 GeneID:75563 MGI:1922813
definition	codon_start : 1 product : axonemal dynein light chain (hp28) homolog protein_id : NP_780432.1

name	Snip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424886 CCDS:CCDS18636.1 GeneID:76793 MGI:2156003
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007249 - I-kappaB kinase/NF-kappaB cascade [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 exception : mismatches in translation product : Smad nuclear interacting protein 1 protein_id : NP_780455.1

name	2310005N01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312536 CCDS:CCDS18637.1 GeneID:70088 MGI:1917338
definition	codon_start : 1 product : hypothetical protein LOC70088 protein_id : NP_081586.1

name	Zc3h12a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24233519 CCDS:CCDS18638.1 GeneID:230738 MGI:2385891
definition	codon_start : 1 note : MCP-1 treatment-induced protein product : zinc finger CCCH type containing 12A protein_id : NP_694799.1

name	LOC194197 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:194197
definition	number : 1 pseudo : _no_value

name	LOC194197 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:194197
definition	number : 2 pseudo : _no_value

name	LOC667064 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667064
definition	number : 1 pseudo : _no_value

name	LOC667064 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667064
definition	number : 2 pseudo : _no_value

name	LOC667064 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667064
definition	number : 3 pseudo : _no_value

name	LOC664991 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664991
definition	number : 1 pseudo : _no_value

name	LOC622334 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253084 GeneID:622334
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to ribosomal protein S7 pseudo : _no_value transcript_id : XR_030761.1

clone name	MSMg01-473I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404I14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-475E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391J05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-345O12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-236N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533D14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-192H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533D14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-420F06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-522N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124K16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-394L17.T7 (MSMg01no394_l17.b1)	MSMg01-394L17.TJ (MSMg01no394_l17.g1)
ACC	AG495719	AG495720
length	845	780
length of high quality (start - end)	329 (74 - 402)	238 (77 - 314)
definition	CHROMAT_FILE: MSMg01no394_l17.b1 PHD_FILE: MSMg01no394_l17.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:40:13 2005	CHROMAT_FILE: MSMg01no394_l17.g1 PHD_FILE: MSMg01no394_l17.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:40:13 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NTCTCAAAATTTGCGGCGCTAAAAGAATCACTATATTCCAGAGAACCGCG GAATTCAAATGTGTTGCCTGGATCGAGTCTTTAAGCATTCATTGGGTTTA GTATTCTCTGGATCTCCTGGATCTACGTTTTGGTGTTTGCCATTAATTAA AAAAAACAAAAACAAAAACAAAAAAAACCCTTGGTCATTACTGCTTCCAA TATTTCTTCAGCTTTGTTCCTCTTCACCTTCTGGCATTAAAATCATGCAT ATAATGCAAGTAGCATTGTATGGACTCAACAGGTTATATTTGGAAATATA CATGTGTATGCAAATGCATATATGTATACAGTTACAGCTGATGAAAGGAG AGACCATGAGTGTAAAACAGAGGAGGGGAGGTATATGGGGGGCTTGGAGG GAGGAAAGACAAACTCCTCTCCTCTCTTTTTAATTTACCCCTTTTTACCC CCACATTCGACATTTTACTTCAATTCTCTTCTTCTTCTCCTTCCTATACC TTTCTTCCCTCTCCCTTCTCCACTTCTACCTATCTTCTACTTCCCACCCC ATTCCCCTTTTTCCCCTTCCCATCCCCTTCATTTACCTCCCATTTTTTCT TCTTTCCTTACCCTCTTACCTATCTTCTTCATCATCGTCCACTATCAATA CCTCACACTTTCCCCTTTTCCCCATCTTTATCCCTTCCCTCCCCCCCTCC CTCATAAATCCTTCATCTTATTCACACTCAAATACCTACCCTATCTCCTC CCCATATTCTCTTCTTCTCCCATATTTATTTCGCATAAACCAATTTTTCA ATCACCCACATATATCCTACTCCACATTTTTTCCCCTTATCTCCC	TCGATGATATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXCAAAAGCTCTCATCTTGTTGGCTG AACTTGTTCTGAGTCTCTAGGTACACACCCATCTCCCTCACCTGGTCACA TTTCCTTGCCTGTCTGCAGGGATCCACAGCATGGCTGGGAGAGAAAGCAG TGAGACCCTGCCAGCTGTGCTCTGTGGCTTTGAAATTTTCTGTTAGGTCT CGTGACAGATCCTCTGAGCTCCCCCAACCCTCTGCTCAGATTGTGTCTAG TCACACCTTTGACGACTGGAATTGTTTATTCCTCTGCTCACTGGCTCTTG AAACCTAGGAGTCTGGGTACCAGGGCTGGCCAGGGCCAGTCAGACAGATT GTAGTGCGTTTCTGTAGGTTTCTGTGTAAAGAGGAGAGGTGACTCCACAC ACCCATTCTGCTCAGTTGCTCACACATGAGTGCTTGTTTGATGAGAATAT ATAAATAAATCCCAAAGGATAACTTAAGACATAAGGAAGGCCTGTCGCAG AGACACCCAGGGACAGACTCCCCCTTCTAAAGATGAATAACGTCTCCCGT CAAGGCCGCTGCTATAAAACACTCACTTTTCTGACTTTCGTTTCAACCGC CAGTAAACCTCTATTATTGTACTCCCTTACCCTTTGTTGCGATCTCCTTA CGCCCCACTGTAATTTCACTACCCTTACCCCCCATTCAAGCCACCCTCGC TTTTAAATCCCAATTATTCTATTCTCCTTT
quality values	Open. Hide. 0 3 8 8 10 8 8 19 19 16 22 26 12 11 11 11 11 23 19 27 9 8 8 6 6 9 9 9 19 23 29 21 27 9 9 9 7 6 6 6 6 6 8 8 10 8 14 18 28 41 33 33 33 35 31 31 31 28 28 21 21 9 9 10 10 10 10 10 11 11 14 11 18 16 19 28 32 43 48 48 59 59 59 57 57 57 57 50 50 50 53 47 47 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 57 40 42 35 36 36 41 57 54 57 57 57 59 57 48 48 48 57 57 57 57 57 57 57 57 57 57 57 68 68 57 57 59 54 50 57 50 57 57 54 54 57 57 57 57 48 48 52 57 57 57 57 57 68 59 59 68 68 57 57 57 57 57 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 59 59 57 57 57 57 57 57 59 59 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 43 43 50 44 43 50 42 44 57 59 59 57 57 57 57 57 57 57 57 59 59 68 59 59 57 57 57 57 57 57 57 57 57 57 48 48 48 48 48 54 59 59 54 54 48 48 48 48 48 48 48 48 48 48 48 57 57 59 59 57 57 57 48 48 48 48 48 48 48 43 47 43 40 33 34 28 23 23 13 13 12 20 11 15 12 12 8 8 8 8 8 9 9 12 10 12 8 8 8 8 8 9 15 10 19 14 13 12 11 10 12 11 11 13 15 11 11 11 17 16 10 10 10 9 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 8 9 9 9 8 10 9 10 10 10 9 9 9 9 9 10 13 10 10 10 19 10 8 8 8 8 8 8 8 8 8 8 8 8 11 13 11 12 11 13 10 10 10 10 8 10 11 11 14 14 16 16 18 18 10 8 8 6 6 10 8 8 8 8 8 10 8 8 8 8 8 11 12 9 9 9 9 9 9 8 8 7 6 8 8 6 6 6 6 10 12 12 10 13 10 10 10 17 15 18 18 10 10 11 8 10 6 6 8 8 12 12 12 11 7 10 6 6 6 6 8 8 8 8 8 8 6 6 8 7 10 10 10 8 8 8 8 8 9 9 9 9 10 9 9 13 15 13 10 10 10 10 10 6 6 8 8 10 8 10 10 19 19 14 10 10 8 8 8 6 6 8 8 8 10 10 10 8 8 11 8 8 8 8 6 6 8 8 9 10 10 8 8 8 9 9 9 12 21 24 22 22 20 34 30 35 21 11 10 10 8 8 10 8 8 10 10 17 17 10 8 8 8 8 8 8 8 13 15 15 11 12 14 11 13 11 10 10 9 9 9 6 6 7 7 10 8 8 8 8 13 14 13 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 8 10 12 12 9 11 10 9 8 8 8 8 8 8 6 6 6 8 8 14 8 9 9 9 9 12 11 6 8 6 6 8 8 6 6 6 8 8 6 6 6 6 8 6 6 7 7 6 8 8 8 8 8 8 8 8 19 22 14 14 10 8 6 6 8 8 8 13 16 10 8 8 6 6 8 8 9 10 12 10 9 9 12 10 9 14 10 10 10 15 17 24 24 28 19 9 9 10 8 8 8 8 8 6 6 7 7	Open. Hide. 8 8 8 8 8 15 11 10 9 10 9 9 10 8 6 6 6 7 6 31 19 24 18 18 18 15 19 30 39 21 23 11 8 7 7 7 8 7 10 9 9 9 19 15 22 26 27 37 37 33 33 36 36 36 33 41 37 37 37 23 23 9 9 11 11 12 11 11 11 15 10 17 19 19 22 28 28 33 33 33 39 39 42 47 47 43 47 42 42 47 59 59 57 48 48 48 48 48 48 57 57 57 57 57 54 54 43 44 43 43 43 44 44 59 59 59 44 47 28 28 23 38 44 57 57 48 48 48 57 57 68 68 68 68 68 68 68 68 68 57 57 48 44 42 42 42 47 57 57 57 57 57 57 57 59 59 59 57 57 50 57 44 43 43 52 52 52 57 50 36 28 24 36 36 37 38 38 43 38 43 43 52 43 43 57 41 43 20 25 20 32 30 46 52 57 57 52 43 43 38 43 31 25 25 37 42 50 50 59 57 57 52 52 52 57 59 59 68 68 59 59 59 59 57 52 48 48 48 50 50 46 50 41 41 41 41 41 41 57 42 42 41 36 30 24 23 27 27 37 38 27 23 20 16 23 22 24 24 24 43 40 57 59 57 57 57 48 48 48 48 59 59 57 57 57 48 48 48 57 57 59 59 59 59 59 57 48 42 42 42 43 42 43 43 43 40 43 43 43 33 34 25 25 25 33 33 39 44 48 23 23 10 10 10 23 22 23 15 11 9 12 9 9 9 9 27 22 32 28 34 34 46 48 46 46 59 44 43 37 37 39 37 39 34 34 28 34 34 47 47 43 43 43 43 28 34 16 16 9 12 12 12 12 20 15 12 18 12 22 28 32 15 13 8 10 10 12 12 10 11 11 17 17 12 13 13 13 13 11 18 21 20 23 23 36 28 35 35 47 44 32 28 17 17 18 22 22 22 17 17 17 27 21 15 10 10 10 11 12 23 25 15 15 14 14 12 19 12 13 13 18 18 15 21 15 15 19 18 11 11 19 24 22 28 24 15 15 13 13 19 23 23 37 37 39 37 37 18 14 9 13 13 24 30 37 37 35 37 24 23 10 9 7 7 8 10 10 15 12 12 12 21 23 25 19 11 10 18 16 19 15 14 14 21 19 20 23 15 10 10 7 7 8 8 8 10 10 10 10 14 17 22 23 21 13 13 10 10 11 13 15 11 9 9 9 9 9 11 11 20 12 12 12 12 12 12 16 11 11 10 13 13 16 9 9 9 9 9 9 10 10 10 10 12 12 13 16 16 11 9 9 9 11 17 17 8 8 8 8 8 8 8 8 8 8 9 12 10 8 8 9 11 9 14 10 9 9 9 11 16 12 8 8 8 8 8 8 9 9 11 11 11 10 9 8 8 6 6 8 8 12 9 6 6 6 6 7 6 8 8 8 10 10 11 8 8 9 9 9 11 10 10 10 9 9 10 11 10 10 13 11 10 10 10 10 10 13 9 9 10 10 8 8 8 8 8 8 8 9 11 11 13 13 8 8 8 8 8 8 6 6 6 8 8 13 13 8 8 8 8 8 8 8 8 11 10 10 8 11 9 9 11 10 13 10 10 10 10 10 10 12 12 10 13 10 10 7 7 8 8 11 12 12 13 11 13 10 9 9 10 10 11 19 10 10 8 8 8 8 10 11 8 10 8 8 8 8 8 7 6 6 6 6 6 8 8 11 6 6 6 6 8 8 8 8 8 8 14 12 8 8 9 10 10 9 9 9 12 12 9 9 9 13 10 10 10 15 17 13 13

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no394_l17.g1 MSMg01no394_l17.g1 CHROMAT_FILE:
MSMg01no394_l17.g1 PHD_FILE: MSMg01no394_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:13 2005
         (238 letters)



>mm_chr4_123899051_123899688
          Length = 638

 Score =  456 bits (236), Expect = e-133
 Identities = 236/236 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaaagctctcatcttgttggctgaacttgttctgagtctctaggtacacacccatctcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaagctctcatcttgttggctgaacttgttctgagtctctaggtacacacccatctcc 260

                                                                       
Query: 61  ctcacctggtcacatttccttgcctgtctgcagggatccacagcatggctgggagagaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcacctggtcacatttccttgcctgtctgcagggatccacagcatggctgggagagaaa 320

                                                                       
Query: 121 gcagtgagaccctgccagctgtgctctgtggctttgaaattttctgttaggtctcgtgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagtgagaccctgccagctgtgctctgtggctttgaaattttctgttaggtctcgtgac 380

                                                                   
Query: 181 agatcctctgagctcccccaaccctctgctcagattgtgtctagtcacacctttga 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatcctctgagctcccccaaccctctgctcagattgtgtctagtcacacctttga 436


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space:   144041
Effective search space used:   144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information