Query= MSMg01no397_a12.b1 MSMg01no397_a12.b1 CHROMAT_FILE:
MSMg01no397_a12.b1 PHD_FILE: MSMg01no397_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:19 2005
(338 letters)
>mm_chr4_116737442_116738179
Length = 738
Score = 629 bits (325), Expect = 0.0
Identities = 334/337 (99%), Gaps = 1/337 (0%)
Strand = Plus / Minus
Query: 1 aagtcagaaaatagtctcccacaaaatcttagctatatgggatgtctctatgtatgcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aagtcagaaaatagtctcccacaaaatcttagctatatgggatgtctctatgtatgcaca 282
Query: 61 tatttacacagtatgcatatagtatataacgtggtgccttaattcttcatttgcaacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tatttacacagtatgcatatagtatataacgtggtgccttaattcttcatttgcaacaat 222
Query: 121 ccatgagaaaacagactattctgtgtttgtgtgcactgtgtctatggtcaggggttgata 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 221 ccatgagaaaacagactattctgtgtttgtgtgcactgtgtctatgatcaggggttgata 162
Query: 181 tcaagtatattcctctatcactttccactttacttttttttttccccttgagacaggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tcaagtatattcctctatcactttccactttacttttttttttccccttgagacaggatt 102
Query: 241 tctctgtatatgtcctggaactcactctgtagacaaggctgtccttgaactcacaaagat 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tctctgtata-gtcctggaactcactctgtagacaaggctgtccttgaactcacaaagat 43
Query: 301 ctgcctgcctctgcctcctgagcgttgggattaatgg 337
|||||||||||||||||||||| ||||||||||||||
Sbjct: 42 ctgcctgcctctgcctcctgagtgttgggattaatgg 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_a12.g1 MSMg01no397_a12.g1 CHROMAT_FILE:
MSMg01no397_a12.g1 PHD_FILE: MSMg01no397_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:19 2005
(208 letters)
>mm_chr4_116576555_116577161
Length = 607
Score = 368 bits (190), Expect = e-106
Identities = 202/206 (98%), Gaps = 1/206 (0%)
Strand = Plus / Plus
Query: 3 gtctcacaaaacattaaacaaaaaacaacaatgacataagaggtacagggaaaacatatc 62
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gtctcacaaaacaa-aaacaaaaaacaacaatgacataagaggtacagggaaaacatatc 261
Query: 63 atgtagagaaactgttcttatatttgaaagtctaggggttgagagactgacatatttgag 122
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 262 atgtagagaaactgttcttatatttgaaagtctaggggttgagagagtgacatatttgag 321
Query: 123 aataaaataaatttagtaaaaattagagatttttgactagggtcaaatcagaggtcctat 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aataaaataaatttagtaaaaattagagatttttgactagggtcaaatcagaggtcctaa 381
Query: 183 gtgggttataatctttgttgttattg 208
||||||||||||||||||||||||||
Sbjct: 382 gtgggttataatctttgttgttattg 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 607
Length adjustment: 9
Effective length of query: 199
Effective length of database: 598
Effective search space: 119002
Effective search space used: 119002
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
