Query= MSMg01no398_g01.b1 MSMg01no398_g01.b1 CHROMAT_FILE:
MSMg01no398_g01.b1 PHD_FILE: MSMg01no398_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:05 2005
(244 letters)
>mm_chr4_125104049_125104692
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Plus
Query: 1 cacagccagccctgctcaggaacgaatcaggaggcaaagctaggaccctgggctgccatg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cacagccagccctgctcaggaacgaatcaggaggcaaagctaggacccagggctgccatg 260
Query: 61 cctgtgctctctgctctgtgctcacaaatgctatgacccggtcctaaaggcccgtgtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgtgctctctgctctgtgctcacaaatgctatgacccggtcctaaaggcccgtgtgct 320
Query: 121 cctctgaaagagaggtcataagcatcctggaggcaagctcttcccttctgccttgcaact 180
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctctgaaagagagggcatcagcatcctggaggcaagctcttcccttctgccttgcaact 380
Query: 181 cctgcccaccccctgggaaagggttgtcccagaagtctcatccacacctttgcctccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgcccaccccctgggaaagggttgtcccagaagtctcatccacacctttgcctccctt 440
Query: 241 ccca 244
||||
Sbjct: 441 ccca 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no398_g01.g1 MSMg01no398_g01.g1 CHROMAT_FILE:
MSMg01no398_g01.g1 PHD_FILE: MSMg01no398_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:05 2005
(195 letters)
>mm_chr4_125250864_125251457
Length = 594
Score = 360 bits (186), Expect = e-104
Identities = 192/194 (98%), Gaps = 1/194 (0%)
Strand = Plus / Minus
Query: 1 caggagagcctaagctgcaagctgcaaggagctaagagaaaagctccctcgtccacagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 caggagagcctaagctgcaagctgcaaggagctaagagaaaagctccctcgtccacagtt 334
Query: 61 ggagaggactagaggagtcagaacccaggctcaccccaccccgtgtgtgcccacctccca 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggagaggactagaggagtcggaacccaggctcaccccaccccgtgtgtgcccacctccca 274
Query: 121 caagggctgagatagcgccttgagactgataatcttgaacaatgggacgtctctactaga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 273 caagggctgagatagcgccttgagactgataatcttgaacaatgggacgtctctac-aga 215
Query: 181 tggggggtggggtg 194
||||||||||||||
Sbjct: 214 tggggggtggggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 594
Length adjustment: 8
Effective length of query: 187
Effective length of database: 586
Effective search space: 109582
Effective search space used: 109582
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
