Query= MSMg01no399_c11.b1 MSMg01no399_c11.b1 CHROMAT_FILE:
MSMg01no399_c11.b1 PHD_FILE: MSMg01no399_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:05 2005
(316 letters)
>mm_chr4_32019935_32020650
Length = 716
Score = 571 bits (295), Expect = e-167
Identities = 308/315 (97%), Gaps = 6/315 (1%)
Strand = Plus / Minus
Query: 5 gaattccagacaaattca---cacagtctttaatttgatacttagtcacttcagtgtctt 61
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gaattccagacaaa---aaagaacagtctttaatttgatacttagtcacttcagtgtctt 479
Query: 62 gtgctgagccagttaagattgcatagtcttgtgaaaacacatgcattcataatcagtcag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gtgctgagccagttaagattgcatagtcttgtgaaaacacatgcattcataatcagtcag 419
Query: 122 ataacaatgctctccagggttcccgagtgggaaagcaagagatcatagattcagatatgt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ataacaatgctctccagggttcccgagtgggaaagcaagagatcatagattcagatatgt 359
Query: 182 ggcttcaaagtcacggcagcatctgagaagttcctgttcttcatttttactctttattct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ggcttcaaagtcacggcagcatctgagaagttcctgttcttcatttttactctttattct 299
Query: 242 tagaattgaaaggaaaacaatgctgtgaacatttctaattaaatacagaataaaactaag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tagaattgaaaggaaaacaatgctgtgaacatttctaattaaatacagaataaaactaag 239
Query: 302 cccagcatccacgag 316
|||||||||||||||
Sbjct: 238 cccagcatccacgag 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_c11.g1 MSMg01no399_c11.g1 CHROMAT_FILE:
MSMg01no399_c11.g1 PHD_FILE: MSMg01no399_c11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:05 2005
(111 letters)
>mm_chr4_31853290_31853800
Length = 511
Score = 176 bits (91), Expect = 3e-49
Identities = 106/111 (95%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 1 aagaaaataagta-ttttttttataattgtttagactaaaatgaacttctttccgagaaa 59
||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 201 aagaaaataagtatttttttttacaattgtttagactaaaatgaacttctttcc-agaaa 259
Query: 60 atccattgtgttatcttcctattactgctgcaaaatacccaaaacagtcaa 110
|||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 260 atccattgtgttatcttcctattactgcaacaaaatacccaaaacagtcaa 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 111
Length of database: 511
Length adjustment: 8
Effective length of query: 103
Effective length of database: 503
Effective search space: 51809
Effective search space used: 51809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
