Query= MSMg01no399_e01.b1 MSMg01no399_e01.b1 CHROMAT_FILE:
MSMg01no399_e01.b1 PHD_FILE: MSMg01no399_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:13 2005
(330 letters)
>mm_chr4_140399134_140399862
Length = 729
Score = 603 bits (312), Expect = e-177
Identities = 321/324 (99%), Gaps = 1/324 (0%)
Strand = Plus / Plus
Query: 7 gaattcctgtgtctctctgtaaactctggatagctgtaatgttagtcagcgctcaggtac 66
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcctgtgtccct-tgtaaactctggatagctgtaatgttagtcagcgctcaggtac 265
Query: 67 agagctgacactgtagtccctcccagagtcagtcaagggacaccacagccaaggcagggc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agagctgacactgtagtccctcccagagtcagtcaagggacaccacagccaaggcagggc 325
Query: 127 cagtcacactgaaggacaatgctaagggcttggtgtccctccatataccctgtgctgacc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cagtcacactgaaggacaatgctaagggcttggtgtccctccatataccctgtgctgacc 385
Query: 187 ttgtcctttccctcctccaaggagtaatggaaagaacagatgtgggagtggccacagctg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttgtcctttccctcctccaaggagtaatggaaagaacagatgtgggagtggccacagctg 445
Query: 247 gcacaacctaccacagacaagcacaggcaggtctcattcgtcccccccaacctatgatgg 306
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 446 gcacaacctaccacagacaagcacaggcaggtctcattcgtcccccccaacccatgatgg 505
Query: 307 tggcactgttgagttcactcggag 330
||||||||||||||||||||||||
Sbjct: 506 tggcactgttgagttcactcggag 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 729
Length adjustment: 9
Effective length of query: 321
Effective length of database: 720
Effective search space: 231120
Effective search space used: 231120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_e01.g1 MSMg01no399_e01.g1 CHROMAT_FILE:
MSMg01no399_e01.g1 PHD_FILE: MSMg01no399_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:13 2005
(166 letters)
>mm_chr4_140567869_140568434
Length = 566
Score = 284 bits (147), Expect = 2e-81
Identities = 159/163 (97%)
Strand = Plus / Minus
Query: 1 caatgacctcgggtacatcctcagggtaccagccctgcccagcccacagtcagccaccag 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 caatgacctcgggcacatcctcagggtaccagccctgcccagcccacagtcagccaccag 304
Query: 61 cttggcagcatctgccaggcctgccacctgctcccaattagcccctgggccctgagcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cttggcagcatctgccaggcctgccacctgctcccaattagcccctgggccctgagcatg 244
Query: 121 gcgctcagcaggaaagcaggaaaccacatgtgtccatgctcca 163
|||||||||||||||||||||||||||||| || || ||||||
Sbjct: 243 gcgctcagcaggaaagcaggaaaccacatgcgttcaggctcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
