MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-401M15
Chromosome	4 (Build37)
Map Location	138,050,466 - 138,050,702
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Hspg2, Ldlrad2, Usp48, Rap1gap, Akp2, Ece1, LOC100040558, Eif4g3, Hp1bp3, Kif17, Ddost, Pink1, Cda, LOC625638, LOC625646, 0610009K11Rik, Camk2n1
Downstream gene	LOC100040618, 4931403E03Rik, Ubxd3, Pla2g2c, Pla2g2f, Pla2g2d, Pla2g5, Pla2g2a, Pla2g2e, Otud3, Rnf186, Tmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik, Hspe1-ps4, 9530077C14Rik, Capzb, Pqlc2, LOC100042808, Akr7a5, LOC625977, LOC626000, Mrto4, C230096C10Rik, Zubr1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Hspg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15530 MGI:96257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 189 ESTs, 5 Proteins

name	Ldlrad2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435811 MGI:3588210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp48 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170707 MGI:2158502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rap1gap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110351 MGI:109338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11647 MGI:87983
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ece1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230857 MGI:1101357
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040558 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs

name	Eif4g3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230861 MGI:1923935
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hp1bp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15441 MGI:109369
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kif17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16559 MGI:1098229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddost (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13200 MGI:1194508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pink1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68943 MGI:1916193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cda (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72269 MGI:1919519
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625638 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625646 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 489 ESTs, 4 Proteins

name	0610009K11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68350 MGI:1915600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Camk2n1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66259 MGI:1913509
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040618 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040618
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	4931403E03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75718 MGI:1922968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 6 Proteins

name	Ubxd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212190 MGI:2443123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pla2g2c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18781 MGI:106638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pla2g2f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26971 MGI:1349661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pla2g2d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18782 MGI:1341796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pla2g5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18784 MGI:101899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pla2g2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18780 MGI:104642
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pla2g2e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26970 MGI:1349660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Otud3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73162 MGI:1920412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 35 ESTs, 1 Protein

name	Rnf186 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66825 MGI:1914075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmco4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77056 MGI:1924306
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htr6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15565 MGI:1196627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665683 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Nbl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17965 MGI:104591
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310028O11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433771 MGI:1913628
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 291 ESTs, 2 Proteins

name	Hspe1-ps4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93751 MGI:1935164
definition	gene_synonym : Cpn10-rs5 note : heat shock protein 1 (chaperonin 10), pseudogene 4 pseudo : _no_value

name	9530077C14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78454 MGI:1925704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Capzb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12345 MGI:104652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pqlc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212555 MGI:2384837
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042808 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042808
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Akr7a5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110198 MGI:107796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625977 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC626000 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 56 ESTs, 10 Proteins pseudo : _no_value

name	Mrto4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69902 MGI:1917152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C230096C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230866 MGI:2443696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Zubr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69116 MGI:1916366
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 350 ESTs, 8 Proteins

name	Hspg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253149 GeneID:15530 MGI:96257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 189 ESTs, 5 Proteins product : perlecan (heparan sulfate proteoglycan 2) transcript_id : XM_978879.2

name	Ldlrad2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702178 GeneID:435811 MGI:3588210
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein receptor A domain containing 2 transcript_id : NM_001033979.1

name	Usp48 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114053324 GeneID:170707 MGI:2158502
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 48 transcript_id : NM_130879.2

name	Rap1gap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487210 GeneID:110351 MGI:109338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rap1 GTPase-activating protein transcript_id : NM_001081155.1

name	Akp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6671532 GeneID:11647 MGI:87983
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alkaline phosphatase 2, liver transcript_id : NM_007431.1

name	Ece1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40556285 GeneID:230857 MGI:1101357
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endothelin converting enzyme 1 transcript_id : NM_199307.1

name	LOC100040558 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253151 GeneID:100040558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs product : hypothetical protein LOC100040558 transcript_id : XM_001474904.1

name	Eif4g3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50838805 GeneID:230861 MGI:1923935
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 4 gamma, 3 transcript_id : NM_172703.2

name	Hp1bp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33468902 GeneID:15441 MGI:109369
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterochromatin protein 1, binding protein 3 transcript_id : NM_010470.1

name	Kif17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130047 GeneID:16559 MGI:1098229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 17 transcript_id : NM_010623.3

name	Ddost (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195797 GeneID:13200 MGI:1194508
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dolichyl-di-phosphooligosaccharide-proteinglycotransferase transcript_id : NM_007838.2

name	Pink1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126215544 GeneID:68943 MGI:1916193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PTEN induced putative kinase 1 transcript_id : NM_026880.2

name	Cda (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037288 GeneID:72269 MGI:1919519
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytidine deaminase transcript_id : NM_028176.1

name	LOC625638 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:126157458 GeneID:625638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Likely orthologue of human family with sequence similarity 43, member B (FAM43B) transcript_id : NM_001081672.1

name	LOC625646 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253178 GeneID:625646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 489 ESTs, 4 Proteins product : similar to ribosomal protein L38 transcript_id : XM_890220.3

name	0610009K11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40548428 GeneID:68350 MGI:1915600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610009K11 gene transcript_id : NM_026689.3

name	Camk2n1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930674 GeneID:66259 MGI:1913509
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium/calmodulin-dependent protein kinase II inhibitor 1 transcript_id : NM_025451.1

name	4931403E03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253179 GeneID:75718 MGI:1922968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 6 Proteins product : RIKEN cDNA 4931403E03 gene transcript_id : XM_144060.5

name	Ubxd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385313 GeneID:212190 MGI:2443123
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UBX domain containing 3 transcript_id : NM_178671.3

name	Pla2g2c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367671 GeneID:18781 MGI:106638
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group IIC transcript_id : NM_008868.2

name	Pla2g2f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803042 GeneID:26971 MGI:1349661
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group IIF transcript_id : NM_012045.3

name	Pla2g2d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130231 GeneID:18782 MGI:1341796
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group IID transcript_id : NM_011109.2

name	Pla2g5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387089 GeneID:18784 MGI:101899
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group V transcript_id : NM_011110.3

name	Pla2g2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:132626635 GeneID:18780 MGI:104642
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group IIA (platelets, synovial fluid) transcript_id : NR_002926.3

name	Pla2g2e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129960 GeneID:26970 MGI:1349660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group IIE transcript_id : NM_012044.2

name	Otud3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372595 GeneID:73162 MGI:1920412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 35 ESTs, 1 Protein product : OTU domain containing 3 transcript_id : XM_131770.7

name	Rnf186 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110681694 GeneID:66825 MGI:1914075
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 186 transcript_id : NM_025786.2

name	Tmco4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981364 GeneID:77056 MGI:1924306
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane and coiled-coil domains 4 transcript_id : NM_029857.2

name	Htr6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130478 GeneID:15565 MGI:1196627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 6 transcript_id : NM_021358.2

name	LOC665683 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372597 GeneID:665683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC665683 transcript_id : XM_978724.1

name	Nbl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679017 GeneID:17965 MGI:104591
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuroblastoma, suppression of tumorigenicity 1 transcript_id : NM_008675.1

name	2310028O11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253180 GeneID:433771 MGI:1913628
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 291 ESTs, 2 Proteins product : RIKEN cDNA 2310028O11 gene, transcript variant 3 transcript_id : XM_901483.3

name	9530077C14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253181 GeneID:78454 MGI:1925704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 9530077C14 gene transcript_id : XM_001479413.1

name	Capzb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352714 GeneID:12345 MGI:104652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : capping protein (actin filament) muscle Z-line, beta transcript_id : NM_009798.3

name	Capzb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83649736 GeneID:12345 MGI:104652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : capping protein (actin filament) muscle Z-line, beta transcript_id : NM_001037761.1

name	Pqlc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703767 GeneID:212555 MGI:2384837
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PQ loop repeat containing 2 transcript_id : NM_145384.1

name	LOC100042808 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253183 GeneID:100042808
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100042808 transcript_id : XM_001479428.1

name	Akr7a5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27659727 GeneID:110198 MGI:107796
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 7, member A5 (aflatoxin aldehyde reductase) transcript_id : NM_025337.2

name	Mrto4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130329 GeneID:69902 MGI:1917152
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MRT4, mRNA turnover 4, homolog (S. cerevisiae) transcript_id : NM_023536.2

name	C230096C10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861264 GeneID:230866 MGI:2443696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C230096C10 gene transcript_id : NM_146157.3

name	C230096C10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861259 GeneID:230866 MGI:2443696
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C230096C10 gene transcript_id : NM_001039200.1

name	Zubr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253188 GeneID:69116 MGI:1916366
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 349 ESTs, 7 Proteins product : zinc finger, UBR1 type 1, transcript variant 2 transcript_id : XM_001479455.1

name	Zubr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253186 GeneID:69116 MGI:1916366
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 350 ESTs, 8 Proteins product : zinc finger, UBR1 type 1, transcript variant 1 transcript_id : XM_001479450.1

name	Hspg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253150 GeneID:15530 MGI:96257
definition	codon_start : 1 product : perlecan (heparan sulfate proteoglycan 2) protein_id : XP_983973.2

name	Ldlrad2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702179 CCDS:CCDS18819.1 GeneID:435811 MGI:3588210
definition	codon_start : 1 product : low density lipoprotein receptor A domain containing 2 protein_id : NP_001029151.1

name	Usp48 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114053325 GeneID:170707 MGI:2158502
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 note : ubiquitin specific protease 31 product : ubiquitin specific protease 48 protein_id : NP_570949.2

name	Rap1gap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487211 GeneID:110351 MGI:109338
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Rap1, GTPase-activating protein 1 protein_id : NP_001074624.1

name	Akp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671533 CCDS:CCDS18821.1 GeneID:11647 MGI:87983
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004035 - alkaline phosphatase activity [Evidence IEA]; GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Tissue Non-Specific Alkaline Phosphatase; tissue-nonspecific alkaline phosphatase product : alkaline phosphatase 2, liver protein_id : NP_031457.1

name	Ece1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40556286 CCDS:CCDS18822.1 GeneID:230857 MGI:1101357
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016512 - endothelin-converting enzyme 1 activity [Evidence IEA]; GO:0016511 - endothelin-converting enzyme activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0004245 - neprilysin activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016486 - peptide hormone processing [Evidence ISS]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : endothelin-converting enzyme-1b; endothelin-converting enzyme-1d; endothelin-converting enzyme-1a product : endothelin converting enzyme 1 protein_id : NP_955011.1

name	LOC100040558 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253152 GeneID:100040558
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474954.1

name	Eif4g3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50838806 GeneID:230861 MGI:1923935
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA]; GO:0006446 - regulation of translational initiation [Evidence IEA] codon_start : 1 product : eukaryotic translation initiation factor 4 gamma, 3 protein_id : NP_766291.2

name	Hp1bp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468903 GeneID:15441 MGI:109369
definition	GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 exception : mismatches in translation product : heterochromatin protein 1, binding protein 3 protein_id : NP_034600.1

name	Kif17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13487898 CCDS:CCDS18823.1 GeneID:16559 MGI:1098229
definition	GO_component : GO:0005871 - kinesin complex [Evidence IDA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IDA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IDA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence IDA] codon_start : 1 note : kinesin 17; N-4 kinesin product : kinesin family member 17 protein_id : NP_034753.1

name	Ddost (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46195798 CCDS:CCDS18824.1 GeneID:13200 MGI:1194508
definition	GO_component : GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008250 - oligosaccharyl transferase complex [Evidence ISS] GO_function : GO:0004579 - dolichyl-diphosphooligosaccharide-protein glycotransferase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0018279 - protein amino acid N-linked glycosylation via asparagine [Evidence ISS] [Evidence IEA] codon_start : 1 product : dolichyl-di-phosphooligosaccharide-proteinglycotransferase protein_id : NP_031864.2

name	Pink1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126215545 CCDS:CCDS18825.1 GeneID:68943 MGI:1916193
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence IDA]; GO:0016301 - kinase activity [Evidence ISS] [Evidence IDA]; GO:0000287 - magnesium ion binding [Evidence IEA] [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0006950 - response to stress [Evidence ISS] codon_start : 1 product : PTEN induced putative kinase 1 protein_id : NP_081156.2

name	Cda (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037289 CCDS:CCDS18826.1 GeneID:72269 MGI:1919519
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0005576 - extracellular region [Evidence ISS] GO_function : GO:0004126 - cytidine deaminase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0001882 - nucleoside binding [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence ISS] [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0009972 - cytidine deamination [Evidence ISS]; GO:0046087 - cytidine metabolism [Evidence IEA]; GO:0019858 - cytosine metabolism [Evidence ISS]; GO:0030308 - negative regulation of cell growth [Evidence ISS]; GO:0045980 - negative regulation of nucleotide metabolism [Evidence ISS]; GO:0051289 - protein homotetramerization [Evidence ISS]; GO:0008655 - pyrimidine salvage [Evidence ISS] codon_start : 1 product : cytidine deaminase protein_id : NP_082452.1

name	LOC625638 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:126157459 GeneID:625638
definition	codon_start : 1 product : hypothetical protein LOC625638 protein_id : NP_001075141.1

name	LOC625646 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82895306 GeneID:625646
definition	codon_start : 1 product : similar to ribosomal protein L38 protein_id : XP_895313.1

name	0610009K11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541787 CCDS:CCDS18828.1 GeneID:68350 MGI:1915600
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68350 protein_id : NP_080965.2

name	Camk2n1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930675 GeneID:66259 MGI:1913509
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0030027 - lamellipodium [Evidence ISS]; GO:0001726 - ruffle [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007155 - cell adhesion [Evidence ISS]; GO:0016477 - cell migration [Evidence ISS] codon_start : 1 note : CaMKII inhibitor protein alpha; CaMKIIN-alpha; CaMKIINalpha product : calcium/calmodulin-dependent protein kinase II inhibitor 1 protein_id : NP_079727.1

name	4931403E03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38078910 GeneID:75718 MGI:1922968
definition	codon_start : 1 product : hypothetical protein LOC75718 protein_id : XP_144060.2

name	Ubxd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520049 CCDS:CCDS18830.1 GeneID:212190 MGI:2443123
definition	codon_start : 1 product : UBX domain containing 3 protein_id : NP_848786.1

name	Pla2g2c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679367 CCDS:CCDS18831.1 GeneID:18781 MGI:106638
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006644 - phospholipid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : phospholipase A2, group IIC protein_id : NP_032894.1

name	Pla2g2f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38454186 CCDS:CCDS18832.1 GeneID:26971 MGI:1349661
definition	EC_number : 3.1.1.4 GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006644 - phospholipid metabolism [Evidence IEA] codon_start : 1 note : mGIIFsPLA2s product : phospholipase A2, group IIF protein_id : NP_036175.2

name	Pla2g2d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7242177 CCDS:CCDS18833.1 GeneID:18782 MGI:1341796
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006644 - phospholipid metabolism [Evidence IEA] codon_start : 1 product : phospholipase A2, group IID protein_id : NP_035239.1

name	Pla2g5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328182 CCDS:CCDS18834.1 GeneID:18784 MGI:101899
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006644 - phospholipid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : phospholipase A2, group V protein_id : NP_035240.2

name	Pla2g2e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755092 CCDS:CCDS18835.1 GeneID:26970 MGI:1349660
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006644 - phospholipid metabolism [Evidence IEA] codon_start : 1 note : mGIIEsPLA2s product : phospholipase A2, group IIE protein_id : NP_036174.1

name	Otud3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94372596 GeneID:73162 MGI:1920412
definition	codon_start : 1 product : OTU domain containing 3 protein_id : XP_131770.6

name	Rnf186 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110681695 GeneID:66825 MGI:1914075
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : ring finger protein 186 protein_id : NP_080062.3

name	Tmco4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313340 CCDS:CCDS18837.1 GeneID:77056 MGI:1924306
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 note : novel DUF726 domain containing protein product : transmembrane and coiled-coil domains 4 protein_id : NP_084133.1

name	Htr6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946684 CCDS:CCDS18838.1 GeneID:15565 MGI:1196627
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : 5-hydroxytryptamine (serotonin) receptor 6 protein_id : NP_067333.1

name	LOC665683 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372598 GeneID:665683
definition	codon_start : 1 product : hypothetical protein protein_id : XP_983818.1

name	Nbl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679018 CCDS:CCDS18839.1 GeneID:17965 MGI:104591
definition	GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : neuroblastoma, suppression of tumorigenicity 1 protein_id : NP_032701.1

name	2310028O11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82895300 GeneID:433771 MGI:1913628
definition	codon_start : 1 product : similar to RIKEN cDNA 2310028O11 gene isoform 3 protein_id : XP_906576.1

name	9530077C14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253182 GeneID:78454 MGI:1925704
definition	codon_start : 1 product : hypothetical protein LOC78454 protein_id : XP_001479463.1

name	Capzb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753262 CCDS:CCDS18841.1 GeneID:12345 MGI:104652
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0008290 - F-actin capping protein complex [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0051016 - barbed-end actin filament capping [Evidence IEA]; GO:0030030 - cell projection organization and biogenesis [Evidence IMP]; GO:0030032 - lamellipodium biogenesis [Evidence IMP] codon_start : 1 note : isoform b is encoded by transcript variant 2; capping protein beta 1; [b]1 cDNA; [b]2 cDNA product : capping protein (actin filament) muscle Z-line, beta isoform b protein_id : NP_033928.1

name	Capzb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83649737 CCDS:CCDS18842.1 GeneID:12345 MGI:104652
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0008290 - F-actin capping protein complex [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0051016 - barbed-end actin filament capping [Evidence IEA]; GO:0030030 - cell projection organization and biogenesis [Evidence IMP]; GO:0030032 - lamellipodium biogenesis [Evidence IMP] codon_start : 1 note : isoform a is encoded by transcript variant 1; capping protein beta 1; [b]1 cDNA; [b]2 cDNA product : capping protein (actin filament) muscle Z-line, beta isoform a protein_id : NP_001032850.1

name	Pqlc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703768 CCDS:CCDS18843.1 GeneID:212555 MGI:2384837
definition	codon_start : 1 product : PQ loop repeat containing 2 protein_id : NP_663359.1

name	LOC100042808 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253184 GeneID:100042808
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479478.1

name	Akr7a5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27659728 CCDS:CCDS18844.1 GeneID:110198 MGI:107796
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004033 - aldo-keto reductase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : aflatoxin B1 aldehyde reductase product : aldo-keto reductase family 7, member A5 (aflatoxin aldehyde reductase) protein_id : NP_079613.2

name	Mrto4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37537520 CCDS:CCDS18845.1 GeneID:69902 MGI:1917152
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0042254 - ribosome biogenesis and assembly [Evidence IEA] codon_start : 1 note : novel protein containing ribosomal protein L10 domain product : muscle protein684 protein_id : NP_076025.1

name	C230096C10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542273 GeneID:230866 MGI:2443696
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; KIAA0090 protein-like; novel DUF1620 domain containing protein product : hypothetical protein LOC230866 isoform 1 protein_id : NP_666269.2

name	C230096C10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861260 CCDS:CCDS18846.1 GeneID:230866 MGI:2443696
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; KIAA0090 protein-like; novel DUF1620 domain containing protein product : hypothetical protein LOC230866 isoform 2 protein_id : NP_001034289.1

name	Zubr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253189 GeneID:69116 MGI:1916366
definition	codon_start : 1 product : retinoblastoma-associated factor 600 isoform 2 protein_id : XP_001479505.1

name	Zubr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253187 GeneID:69116 MGI:1916366
definition	codon_start : 1 product : retinoblastoma-associated factor 600 isoform 1 protein_id : XP_001479500.1

name	LOC100040618 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040618
definition	number : 2 pseudo : _no_value

name	LOC100040618 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040618
definition	number : 1 pseudo : _no_value

name	LOC625977 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625977
definition	number : 1 pseudo : _no_value

name	LOC625977 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625977
definition	number : 2 pseudo : _no_value

name	LOC625977 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625977
definition	number : 3 pseudo : _no_value

name	LOC626000 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253185 GeneID:626000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 56 ESTs, 10 Proteins product : similar to Cyclin D3 pseudo : _no_value transcript_id : XR_034198.1

clone name	MSMg01-405A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338D04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-434K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406P20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-437E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471I02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243B17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-401M15.T7 (MSMg01no401_m15.b1)	MSMg01-401M15.TJ (MSMg01no401_m15.g1)
ACC	AG501090	AG501091
length	748	853
length of high quality (start - end)	238 (77 - 314)	---
definition	CHROMAT_FILE: MSMg01no401_m15.b1 PHD_FILE: MSMg01no401_m15.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:15:30 2005	CHROMAT_FILE: MSMg01no401_m15.g1 PHD_FILE: MSMg01no401_m15.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:15:30 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	GCTCTATAATTGGGCGCAAAAGACNCACATTTTCCTACCTCGGCGGAANN CACATTCTTGCCTAAACAGAGCNGAAAGGCCCAGGAAGGGGGAATTTCCT GGAGGGAGCTGGTGGGACCGAATCCTGTGCCCAACCCCAGTGCCACTCAG AGAGCTGTACACCTGCAGCTTCCCATGCAGGAGATAGGAGCAGGCAACCT GTCTTTCCCCATTGTCTCACGTCATATGTCTTTTAGTGTCTTATGGTTTA TTAGGTCCCGACCCCTCCGCAGGCACTCCGGCTCTGGGCAGCCTTTTGCC TGCATTGGATCTCTCGGTTGGCTTTGCTTCCTGNAAAGGNAAAGAGCCCA GCTCTGTATTACCCACACGCACTAACTCAGGGATCTCAGGGCTGCCCCAG AGCTCCCTGCAGCCACTCACTGGTTTAGGGAGGTGACAACATGCGACACC ACACCTGCATCCATCCCCTACTGTGTCCCCGTGTCATCCAGGCAGAAGTG TCTGCACCATGCAGGAGCTCCTCACCACCCCCAACCCCCCATTCAGTGCT GCCATGGCCACACAGAAATTGGCTTGCCATCTGCTGTCTGCGGTTACCTC GTCTGGCCGTGCCTCTGCCATGTTAGCCATTATTGCGTTAATACATTCTT TTTTTTTTTTTCACACCATTTCGTCTTTTCCCGTTGCCCTTCAATCTCTG TTATCCTTTAACCTTTTTTTACCTTGCTGCTTTCCCTGCCTTTTTACC	TCCCATGCTCTGGTAGGCCTGGGGCGCCTGGTCATCACTTTGGTGACCTA TAGAAGTACCGACCCTTCTTTAAAGACTTGAAAGGGCTGAGGATTATTGA AAAGTTTTTTTCCCCCGAGAGAGAGAGAGAGAGAGAGTGAGATAGAGACA TTTTTTTAGTTTCTCCTCCCTTTCTCTCCCTCCCCTCTTTTTTTCCTCTC CTTCCCTTTTTCTTTCTTCTCTCTCCTCCTTTTTTTCCCCCCTCCTTTTT TTTTCCCCCCTCTCCNCCCCTTCCCTCCTTTTTCTTCCCCCTTCCTCCTC TCCCTCTTCCCCCCCCTTTTCGCTCCCTTTTCCCCCCCCCCCCCCCCCCC CCCCCCCCCCTCTTTTTTTCCCCCCCCCCCCCCTTTCCTTTTCCTCCCCC TCCTCCCCTCTCTTCTTTTTTTTTTTCCCCCCCCCCCTTTTTTTTTTTTC CCTCTCTTCTCCCTTTTCTCCCTCTTTTTTTCCTCCTTCTTTTTTTTTTT TCTTCCCCCCCTTTCTTTTCTCTTTCCTTCCCTTCTTTCCTCTTCCCTCC TTTTTCCTTCTCTTCTTCTTTTTCCTTTCTCTCGTTTCCCCCCCTCTTCC CTTTCTTCCCTGCTCCTTCCCTTCTTTTTTTTCTCTTTCCTTTTCTCTTT CCTTTCTCTTCACTCCTCCCTCTCCTTTTCTCCCTTTCCTTCCCTTCCCT CCCTTCTTACCCCCGCCTTCCCTTTTCTTTTTTTCTTTCCTCCCCTCTTC TCCCCCTCTTTTCTCTCCCTTTCTTTTCTCTTTTCTTTTTCCCTTGCTTC TTTCTTCTCTCCTCTTTCTTGTTCCCCCCTCCCTTTCCTTTTTCCCCCTT CCN
quality values	Open. Hide. 6 6 8 8 6 6 6 6 6 6 15 19 10 8 8 19 17 16 9 9 9 7 8 3 0 3 8 8 6 8 9 7 7 7 6 6 8 8 8 8 8 8 8 10 11 27 27 3 0 0 3 8 19 19 21 9 9 6 6 6 6 6 6 6 7 8 8 8 8 11 6 3 0 3 8 9 14 21 21 37 37 37 37 24 9 9 9 9 9 9 15 16 37 37 37 37 39 50 50 50 50 53 48 50 50 50 59 34 33 20 12 11 11 11 11 11 11 13 13 19 19 28 28 33 33 46 48 48 59 48 57 48 48 48 57 47 47 39 40 44 44 57 57 48 48 53 43 57 54 43 44 42 42 26 26 11 12 12 12 11 21 25 42 46 48 46 46 43 43 44 57 57 59 59 59 59 47 44 43 44 44 47 47 47 57 57 57 57 57 57 54 57 57 59 57 48 48 48 57 48 54 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 48 57 59 57 59 59 57 57 47 43 35 30 34 34 41 41 41 27 27 15 11 11 9 20 12 11 11 20 25 25 47 47 47 59 59 59 59 59 57 57 57 57 57 57 59 59 57 57 57 59 59 59 59 59 59 59 57 57 57 59 59 59 48 48 59 59 48 48 48 59 59 57 57 57 57 57 48 59 59 48 47 47 47 30 31 12 9 7 7 7 6 6 6 6 6 6 6 6 6 8 15 21 47 47 47 59 29 27 3 0 3 27 27 29 3 0 3 27 27 59 59 47 47 47 59 47 34 34 19 24 16 21 13 13 12 25 18 12 11 12 12 11 11 11 12 12 24 18 28 20 28 28 37 37 43 43 40 40 43 32 32 26 23 14 15 28 32 43 46 46 46 48 47 43 43 59 59 34 34 23 31 30 40 40 34 27 17 17 22 30 37 36 36 23 18 18 15 12 12 10 13 10 11 10 10 12 12 18 18 23 24 29 21 15 15 22 28 32 23 23 23 44 44 57 57 44 42 30 30 24 32 31 28 19 25 25 42 37 39 43 46 46 54 47 48 48 42 46 44 44 39 32 24 30 28 32 22 23 21 24 18 23 18 23 23 20 12 11 13 10 10 10 12 12 11 14 10 10 12 14 17 25 31 25 18 13 12 18 15 14 14 12 12 14 24 26 22 22 17 17 16 18 15 10 9 13 11 10 10 14 29 26 39 39 37 23 18 9 9 9 18 11 11 11 13 10 10 10 10 10 10 14 10 10 10 8 8 10 10 11 11 8 8 8 8 12 8 10 12 12 11 10 9 8 8 8 8 17 8 13 10 8 8 8 10 8 8 8 8 8 8 8 8 8 8 10 11 10 10 10 10 11 11 11 9 9 9 8 15 10 8 8 8 10 15 10 10 10 10 11 11 11 9 9 8 8 8 12 10 10 8 8 11 8 8 8 6 6 8 8 9 11 8 8 8 11 9 11 19 14 14 19 22 29 13 8 6 6 8 8 13 15 11 10 11 8 12 8 8 8 8 8 8 8 11 9 10 11 10 10 10 9 9 9 10 8 8 8 8 8 8 8 8 6 6 7 6 8 8 9 9 9 8 10 8 8 8 8 8 10 14 14 22 13 19 9 8 8 8 8 8 8 8 6 8 6 10 12 16 15 12 8 8 8 8 9 10 12 12 10 9 9 9 9	Open. Hide. 8 8 7 8 8 8 9 9 10 15 17 19 15 8 8 8 8 9 9 9 19 23 23 23 23 19 15 18 9 3 3 3 6 6 6 6 7 7 8 9 9 10 13 21 22 20 21 28 26 26 41 23 23 9 6 6 3 3 3 6 6 6 6 14 12 13 15 21 25 19 15 19 23 30 21 27 19 28 20 22 34 41 57 34 34 19 23 34 34 28 22 22 28 18 24 24 23 19 13 13 13 16 13 10 10 10 10 8 15 8 8 8 6 9 9 9 9 9 15 12 13 13 15 15 18 11 11 11 15 28 29 32 28 18 15 13 13 13 13 15 13 12 12 10 15 12 8 8 8 8 8 9 11 14 13 13 11 10 10 10 10 8 10 10 10 9 9 10 12 11 11 18 12 8 8 8 8 10 10 13 10 13 10 10 10 19 9 10 10 19 19 15 22 13 10 8 8 8 8 8 8 9 10 16 19 19 19 12 10 10 15 8 8 8 8 8 8 8 10 11 13 8 8 8 8 9 10 10 15 15 16 17 10 8 10 12 14 22 22 12 12 10 23 11 10 9 11 11 16 32 26 16 9 7 7 9 8 8 8 10 8 10 10 10 3 0 3 17 19 18 20 28 25 27 22 12 10 10 19 10 24 22 28 11 10 8 10 10 17 16 10 13 12 12 9 18 8 8 9 14 22 30 22 22 8 8 8 8 8 9 8 17 12 10 17 10 10 10 12 6 3 3 3 6 6 9 9 7 12 9 12 12 27 27 15 9 8 15 10 12 17 17 10 10 12 23 24 23 19 19 19 19 30 28 34 34 39 37 23 26 14 14 9 18 12 12 14 13 10 10 9 8 8 10 10 10 19 23 23 19 23 11 11 11 12 12 12 16 12 12 17 17 19 9 9 8 8 8 8 10 8 8 8 8 8 8 8 8 6 6 6 6 8 8 9 13 14 16 27 31 28 28 16 14 11 9 8 8 9 9 21 19 28 22 10 8 8 8 11 12 12 12 12 22 17 29 29 22 19 16 20 11 11 10 13 10 8 8 8 8 8 12 13 13 13 6 6 6 6 10 18 13 14 10 13 10 10 11 9 11 8 8 8 12 10 12 10 9 8 6 8 8 10 19 10 11 10 16 12 13 8 8 8 8 10 19 14 8 8 8 8 8 8 7 7 7 15 15 18 21 19 13 12 15 6 6 6 6 10 10 9 11 8 8 10 13 9 8 8 8 8 8 8 8 8 8 9 9 12 19 19 9 8 8 22 15 17 8 10 6 6 8 8 10 9 8 13 8 8 8 8 8 8 8 10 10 10 10 10 13 10 8 7 7 7 10 8 9 9 8 10 10 12 10 10 9 9 17 10 10 10 8 8 6 6 8 8 8 13 8 6 6 6 7 7 8 8 8 8 10 13 10 10 12 12 10 10 13 15 23 8 8 6 6 8 10 10 11 11 11 11 11 17 10 6 8 6 6 10 6 6 8 8 8 8 6 6 8 8 11 9 9 9 13 9 9 9 9 10 11 12 12 11 10 12 12 10 15 6 6 8 8 8 8 10 8 12 11 22 21 23 15 8 8 8 8 9 13 14 14 14 12 13 12 13 19 19 8 6 6 8 6 16 9 9 9 9 11 11 13 8 8 8 8 8 10 10 10 16 18 24 15 13 10 10 10 13 13 16 9 10 11 18 21 16 11 9 8 8 6 9 10 24 19 22 19 15 10 12 9 10 13 24 12 12 9 9 9 14 14 8 8 7 7 9 12 17 10 8 8 8 8 8 8 8 8 10 10 16 16 19 15 13 9 9 9 8 6 6 6 8 8 9 10 10 8 8 6 10 6 6 8 8 8 9 16 16 12 13 9 9 9 13 13 10 10 8 8 8 14 8 10 10 16 16 20 20 18 16 11 10 12 8 8 9 14 13 14 19 19 15 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no401_m15.b1 MSMg01no401_m15.b1 CHROMAT_FILE:
MSMg01no401_m15.b1 PHD_FILE: MSMg01no401_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:30 2005
         (238 letters)



>mm_chr4_138050266_138050903
          Length = 638

 Score =  397 bits (205), Expect = e-115
 Identities = 229/237 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggcccaggaagggggaatttcctggagggagctggtgggaccgaatcctgtgcccaacc 60
           |||||||||| | ||||||||||||||||||||||| ||||  |||||||||||||||||
Sbjct: 201 aggcccaggatgtgggaatttcctggagggagctggagggagtgaatcctgtgcccaacc 260

                                                                       
Query: 61  ccagtgccactcagagagctgtacacctgcagcttcccatgcaggagataggagcaggca 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagtgccactcagagagctggacacctgcagcttcccatgcaggagataggagcaggca 320

                                                                       
Query: 121 acctgtctttccccattgtctcacgtcatatgtcttttagtgtcttatggtttattaggt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 321 acctgtctttccccattgtctcacgtcatatgtcttttagtgtcttatggttgaataggt 380

                                                                    
Query: 181 cccgacccctccgcaggcactccggctctgggcagccttttgcctgcattggatctc 237
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccgacccctccgcaggcactccggctctgggcagccttttgcctgcattggatctc 437


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space:   144041
Effective search space used:   144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information