Query= MSMg01no402_j18.b1 MSMg01no402_j18.b1 CHROMAT_FILE:
MSMg01no402_j18.b1 PHD_FILE: MSMg01no402_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:34 2005
(140 letters)
>mm_chr4_71769701_71770240
Length = 540
Score = 248 bits (128), Expect = 1e-70
Identities = 137/140 (97%)
Strand = Plus / Plus
Query: 1 agaataattaatattggctgtatacttctaagtgcaaacatagaggaacgtataggttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaataattaatattggctgtatacttctaagtgcaaacatagaggaacgtataggttat 260
Query: 61 ttcccaggatggtactgagtgctgataaaaactcaaagcgaacctgagtaagtgcctgat 120
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 261 ttcccaggatggtactgagtgctgataaaaactcaaagtgaacctcagtaagtgcctgat 320
Query: 121 gagggagcatgttaacctga 140
||||||| ||||||||||||
Sbjct: 321 gagggagtatgttaacctga 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 140
Length of database: 540
Length adjustment: 8
Effective length of query: 132
Effective length of database: 532
Effective search space: 70224
Effective search space used: 70224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_j18.g1 MSMg01no402_j18.g1 CHROMAT_FILE:
MSMg01no402_j18.g1 PHD_FILE: MSMg01no402_j18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:34 2005
(241 letters)
>mm_chr4_71847982_71848621
Length = 640
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%), Gaps = 1/241 (0%)
Strand = Plus / Minus
Query: 1 cagctccccacaggtagttatttgcagggggagggatgttatcaaaattgttagcagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cagctccccacaggtagttatttgcagggggagggatgttatcaaaattgttagcagtcc 381
Query: 61 ttataaactccattcacactcttggccttgcacatcttgctccatttatacttccatctt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 380 ttataaactccattcacactcttggccttgcacatcttgctccatttatatttccatctt 321
Query: 121 gtttctgtttttcaatcctggcattcttttctctctgtctgatttcacttcatttttttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 320 gtttctgtttttcaatcctggcattcttttctctctgtctgatttcacttca-ttttttt 262
Query: 181 tttcattgcaattgtaaagtcttattgatttcctatttagatcataagcattaaaaacca 240
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tttcattgtaattgtaaagtcttattgatttcctctttagatcataagcattaaaaacca 202
Query: 241 a 241
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 640
Length adjustment: 9
Effective length of query: 232
Effective length of database: 631
Effective search space: 146392
Effective search space used: 146392
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
