Query= MSMg01no403_g24.b1 MSMg01no403_g24.b1 CHROMAT_FILE:
MSMg01no403_g24.b1 PHD_FILE: MSMg01no403_g24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:43 2005
(416 letters)
>mm_chr4_119715485_119716300
Length = 816
Score = 791 bits (409), Expect = 0.0
Identities = 412/413 (99%)
Strand = Plus / Minus
Query: 4 ggaattctttgcatgtgtgataacggtgagcttgctgcttcctctgtactaggcactgtt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ggaattctttgcatgtgtgataacggtgagcttgctgcttcctctgtactaggcactgtt 731
Query: 64 ctaggctctccaccaaggtcatagcatggaactggggtcctgtcaagtggttgcatagtc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ctaggctctccaccaaggtcatagcatggaactggggtcctgtcaagtggttgcatagtc 671
Query: 124 cttgtttatggccaagaaaacagaggttcagagactcaggtcacttgatcaaggctaaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cttgtttatggccaagaaaacagaggttcagagactcaggtcacttgatcaaggctaaaa 611
Query: 184 atggtcagaagaagggcagggcagagtctgagggacaagttgaacccatccttccatttg 243
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 atggtcagaagtagggcagggcagagtctgagggacaagttgaacccatccttccatttg 551
Query: 244 caaatgagtcggttctcacgtcttcccatggcccctgtaatctaacccataaagaaagtc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 caaatgagtcggttctcacgtcttcccatggcccctgtaatctaacccataaagaaagtc 491
Query: 304 cccccgaaaatccccctttctgttattgatcgcttcctctattgtgcaccatctttaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cccccgaaaatccccctttctgttattgatcgcttcctctattgtgcaccatctttaaaa 431
Query: 364 gaatgtacatcatataagccgggtaaggaggctgagcttgaactgcacaggga 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaatgtacatcatataagccgggtaaggaggctgagcttgaactgcacaggga 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_g24.g1 MSMg01no403_g24.g1 CHROMAT_FILE:
MSMg01no403_g24.g1 PHD_FILE: MSMg01no403_g24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:43 2005
(336 letters)
>mm_chr4_119503908_119504643
Length = 736
Score = 638 bits (330), Expect = 0.0
Identities = 334/336 (99%), Gaps = 2/336 (0%)
Strand = Plus / Plus
Query: 1 actgtgtagctcaggctgaccttaaaaccacaattccgcattaccctgctgagaactgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgtagctcaggctgaccttaaaaccacaattccgcattaccctgctgagaactgag 260
Query: 61 accatagacattcagcaccatgcttgctttataatcaggctcttttagtttaatttttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accatagacattcagcaccatgcttgctttataatcaggctcttttagtttaatttttga 320
Query: 121 gaatttcatatatgattacttcctgtatatcatttccctcttcccttccaacccttcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaatttcatatatgattacttcctgtatatcatttccctcttcccttccaacccttcact 380
Query: 181 acctctcaaatccacgagtgcacacacacacacacacacacacacacacacacacacacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 acctctcaaatccacgagtgcacacacacacacacacacacacacacacacacacac--c 438
Query: 241 ctactgagtccatttagtgttgctcttagactgaccacttaggacaggatcatctatcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctactgagtccatttagtgttgctcttagactgaccacttaggacaggatcatctatcag 498
Query: 301 ggccttttctctgaggaagactgattccccctcttc 336
||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggccttttctctgaggaagactgattccccctcttc 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
