Query= MSMg01no404_o20.b1 MSMg01no404_o20.b1 CHROMAT_FILE:
MSMg01no404_o20.b1 PHD_FILE: MSMg01no404_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:45 2005
(213 letters)
>mm_chr4_131784905_131785517
Length = 613
Score = 366 bits (189), Expect = e-106
Identities = 195/197 (98%)
Strand = Plus / Plus
Query: 5 gaattcttcaaatctgaccactttacatacacttctttccacagctacttcacccagttc 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcaaatcagaccactttacatacacttctttccacagctacttcacccagttc 264
Query: 65 tatgtgttacttttggtgtttagagaaaaggtcttgatatgtaaccagctaggcttaaac 124
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 265 tatgtgttacttttggtgtttagagaaaaggtcttgatatataaccagctaggcttaaac 324
Query: 125 ccctgagcctccacttcctgtggactgggattatatatatatatatatatatatatatat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccctgagcctccacttcctgtggactgggattatatatatatatatatatatatatatat 384
Query: 185 atatatatatatatata 201
|||||||||||||||||
Sbjct: 385 atatatatatatatata 401
Score = 89.7 bits (46), Expect = 1e-22
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 168 tatatatatatatatatatatatatatatatatatatatatatata 213
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatatatatatatatatatatatatatatatatatatatatatata 356
Score = 89.7 bits (46), Expect = 1e-22
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 166 tatatatatatatatatatatatatatatatatatatatatatata 211
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatatatatatatatatatatatatatatatatatatatatatata 356
Score = 89.7 bits (46), Expect = 1e-22
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 164 tatatatatatatatatatatatatatatatatatatatatatata 209
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatatatatatatatatatatatatatatatatatatatatatata 356
Score = 89.7 bits (46), Expect = 1e-22
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 162 tatatatatatatatatatatatatatatatatatatatatatata 207
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatatatatatatatatatatatatatatatatatatatatatata 356
Score = 89.7 bits (46), Expect = 1e-22
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 160 tatatatatatatatatatatatatatatatatatatatatatata 205
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatatatatatatatatatatatatatatatatatatatatatata 356
Score = 89.7 bits (46), Expect = 1e-22
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 158 tatatatatatatatatatatatatatatatatatatatatatata 203
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatatatatatatatatatatatatatatatatatatatatatata 356
Score = 89.7 bits (46), Expect = 1e-22
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 156 tatatatatatatatatatatatatatatatatatatatatatata 201
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tatatatatatatatatatatatatatatatatatatatatatata 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 109
Number of extensions: 51
Number of successful extensions: 50
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 14
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no404_o20.g1 MSMg01no404_o20.g1 CHROMAT_FILE:
MSMg01no404_o20.g1 PHD_FILE: MSMg01no404_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:46 2005
(452 letters)
>mm_chr4_131831610_131832460
Length = 851
Score = 803 bits (415), Expect = 0.0
Identities = 442/451 (98%), Gaps = 1/451 (0%)
Strand = Plus / Minus
Query: 1 agatctcaaatactatggaagtatcttaaaagttacagtccttgacttgaaatggagtta 60
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 835 agatgtcaaatactatggaagtatcttaaaagttacagtccttgacttgaaaaggagtta 776
Query: 61 agaagctggttttggtgatatagccttgaatcaccagcgctctgaagtcagaggcaggtg 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 agaagctggttttggtgatgtagccttgaatcaccagcgctctgaagtcagaggcaggtg 716
Query: 121 catctctgagtttgaggccagcctggtctacacagcaatttccaggctagggggagctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 catctctgagtttgaggccagcctggtctacacagcaatttccaggctagggggagctaa 656
Query: 181 gtagtttggggaggaggggtgtgctttcattcagtggaaggatttataaatattacttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gtagtttggggaggaggggtgtgctttcattcagtggaaggatttataaatattacttat 596
Query: 241 atttcattcttttgcatactacacatggcaggaaatccacttagaaaagctcaagaaagc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 atttcattcacatgcatactacacatggcaggaaatccacttagaaaagctcaagaaagc 536
Query: 301 tttggaggcacatttgcagataagctactcagtactttatgacaaaccccttaacctctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tttggaggcacatttgcagataagctactcagtactttatgacaaaccccttaacctctc 476
Query: 361 tgaacagacaacaggactaaccatacttaactgtggggctgtgataaggaagggatggaa 420
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 475 tggacagacaacaggactaaccatacttaactgtggggctgtgataaggaaggggtggaa 416
Query: 421 tacttaaaagtgttttaagttgttcatggtg 451
|||||||||||| ||||||||||||||||||
Sbjct: 415 tacttaaaagtg-tttaagttgttcatggtg 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 851
Length adjustment: 10
Effective length of query: 442
Effective length of database: 841
Effective search space: 371722
Effective search space used: 371722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
