Query= MSMg01no407_b16.b1 MSMg01no407_b16.b1 CHROMAT_FILE:
MSMg01no407_b16.b1 PHD_FILE: MSMg01no407_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:39 2005
(595 letters)
>mm_chr4_124716901_124717896
Length = 996
Score = 1098 bits (568), Expect = 0.0
Identities = 588/596 (98%), Gaps = 4/596 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttgaagcaggataaaagtcaaagtggagttagtggtaacg-taacagaatgtt 62
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 606 ggaattcttgaagcaggataaaagtcaaagtggagttagtggtaacgttaacagaatgtt 547
Query: 63 aaaggctgcagagactctcctttaaaacaaacacaacacacacaccttcctcccttagca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aaaggctgcagagactctcctttaaaacaaacacaacacacacaccttcctcccttagca 487
Query: 123 cagggccctgggtaagccccagctggggagctcatgagtgatggatcagccccatggctt 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 486 cagggccctgggtaagccccagctggggagctcatgagtgatggatcagccccacggctt 427
Query: 183 ccaaacatcactgatcctcctgaggtggcctcattgacctggactccctgagcttgtggc 242
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ccaaacatcactgatcctcccgaggtggcctcattgacctggactccctgagcttgtggc 367
Query: 243 ttatattctcttgctagcttctaactgagggaatgtctgtccacaaggaaaactgcattt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttatattctcttgctagcttctaactgagggaatgtctgtccacaaggaaaactgcattt 307
Query: 303 tctgtggcaatgggttctgaagtcagtgagtaaaaattaagtatgactaggctgtagaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tctgtggcaatgggttctgaagtcagtgagtaaaaattaagtatgactaggctgtagaga 247
Query: 363 tggctcagtgggtaaataccaagcttaatccccagaagccatgtt---aaaaaaaaaaaa 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 246 tggctcagtgggtaaataccaagcttaatccccagaagccatgttaaaaaaaaaaaaaaa 187
Query: 420 aaaaaaactacacaaaaagatgcagtagtgttagtctgtatcccaggagatggtgggtgg 479
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 186 aaaaaaactacacaaaaagatgcagtagtgttagtttgtatcccaggagatggtgggtgg 127
Query: 480 agacaagtgacacacaaccatattaattatactaacagtgtgagcaaatattatcctcag 539
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 126 agacaagtgacacacaaccatattaattatactaacagtgttagcaaatattatcctcag 67
Query: 540 aaatcttataactgggttggagagatagcttatcaaggacacacactgctcttcca 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aaatcttataactgggttggagagatagcttatcaaggacacacactgctcttcca 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 996
Length adjustment: 10
Effective length of query: 585
Effective length of database: 986
Effective search space: 576810
Effective search space used: 576810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_b16.g1 MSMg01no407_b16.g1 CHROMAT_FILE:
MSMg01no407_b16.g1 PHD_FILE: MSMg01no407_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:39 2005
(435 letters)
>mm_chr4_124576282_124577116
Length = 835
Score = 824 bits (426), Expect = 0.0
Identities = 432/434 (99%)
Strand = Plus / Plus
Query: 1 tttatagggttttccacattgagatcatgccatcccatgaggcctttgtgtcttcccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatagggttttccacattgagatcatgccatcccatgaggcctttgtgtcttcccatt 260
Query: 61 cacgacttttgtttgttttccttgcctggttgctttggctagagcttttagcagtgactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacgacttttgtttgttttccttgcctggttgctttggctagagcttttagcagtgactg 320
Query: 121 gcatcctggcctttctccagacagaacgctccccgtctttcactcttgagtgtgatgctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatcctggcctttctccagacagaacgctccccgtctttcactcttgagtgtgatgctc 380
Query: 181 actgtgggctttccacgtttgtcctttatcatgttggggtgattttcttctaatcctcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgtgggctttccacgtttgtcctttatcatgttggggtgattttcttctaatcctcgc 440
Query: 241 ttgtctgcagccataccgccgtgaacgagccaatctgggctgcacactctcttagctctt 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 ttgtctgcagccataccgccgtgaacgagccaatctgggctgcacactttcttagctctt 500
Query: 301 caaaccacagaatgagactgaaggatgagaagcaagcagaatgaggaaaactgggaaggc 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 caaaccacagaatgagactgaaggatgagaagcaagcaggatgaggaaaactgggaaggc 560
Query: 361 aagcagggctttccttcccagtaggcaacaaaagtgagagaagccttggccacaaattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagcagggctttccttcccagtaggcaacaaaagtgagagaagccttggccacaaattct 620
Query: 421 ccctaagcccctgg 434
||||||||||||||
Sbjct: 621 ccctaagcccctgg 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
