TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTGACATATCCAAGTGTTCCAACATCCCAGAAATACTTGAAGCCAACA
AACTTGGAATTCAGTAAGAAAGTTACCTATTCAGTAACTAATTAAGCATT
ACAAAGGATGGAGCTGGATTTGGTAACTAATTAAGCATTAGAAAGGACTG
ATCGGAGCAGCTTGGGTTGGTCTGCAGAGTGTTTACTTGGGACAGCAGCC
AGTCTCATGAAAACAAAGAAATACACATTGGCCTAGCTAATAGGTGGTTT
TACCATGAAAGAGTTAGGGAATCCCACTGAGACAGAGATCTTCAGTACAG
CCAGGTCTAGCAGGCTACATGGCATATTAGAAACAAGCTGGTGATTTCTT
CTGACAAATGGAGATTCTACACAGATACTTAAAAGTTACACTCATACAAG
AATTTATCAGGGCCCAGGAAATAGGGGGGGTTATGGTATTGCATTATTCA
TGAGAAGGTCTGTTAGAGCAGAACCCCTGGTGGTGGGCTTAACAATAGAC
TAGCTTTACACCTGACTCACTTCTTTGTGGCAGCTGCATGGTCCCTGCCT
TCTTTTGATGTATACATTCCTTTTGTATTGTGTCACTGCAACTCGGCGGA
TGTATCTCTCCCGGTTTCTTGGTATTCTTCTGTATAAAAAGTTCGATGCT
CCACTTGACAATATCAATCAGGTTCTACACAATTCCCCCGGGGGGATTTG
TTCCTCTTTTTGCCAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAGTGCTTGTTTATCTCCTCTGAGT
CACTTGTAAATTTTACTAGATACCAAGTGCAATTATGCATGTACTTGTTT
CAGTGTCATGGAGTTCATAAATTCATAATTTAATAATTTTTCAGTTCACT
TCTCCTATCCTGGAATTTGACATGCCTTGTGTTTTGGTATTACAGTTTAT
GCTTTCTTGGACATCTATTCTGGAGTGTTTAGAAGTAACAGTTACATAAT
GTTTTAGCTTGACCATACTATGGTCATACATAGTTCCAGAAAGAATGAAT
TTGAACCACCGGTACTGGTCCTTTAAAAGTTCATTTTCTATTTAAGATCT
TCTGTTTATATGCATCAAATTCTCTTTGATTCACCAAAAGGTGGATTTTT
TTCTAACTTGTGCTATCCCTATCATCACTTTTTTCTCAAGTTCAAGGATG
CCTTCACTGAAAACTAAGAAACTGGTTAGCATGAATCATAGGCATGAAAA
GGAACATAAAGAATGACCTCTTAGTTTCACTTATTGCCTACACTATTTCA
TGCTCCTTGCTTTATCTAATACTCATGGCAGTTCCCACTATAACAACTTA
TGGCTTTCTTTTCAGTACGCATAGTCTACATTATCAGTGGAGATCTCCGA
GTGCCCTTCCCTATTCCTAGCTGTTATCGGGGTTAAAAAAACTTTAAAAG
GCCAAACAAATATGTTTTN

Query= MSMg01no411_c18.g1 MSMg01no411_c18.g1 CHROMAT_FILE:
MSMg01no411_c18.g1 PHD_FILE: MSMg01no411_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:08 2005
         (493 letters)



>mm_chr4_95937510_95938402
          Length = 893

 Score =  907 bits (469), Expect = 0.0
 Identities = 487/493 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagtgcttgtttatctcctctgagtcacttgtaaattttactagataccaagtgcaatta 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 693 aagtgcttgtttatctcctctgagtcacttgtaaattttactagaaaccaagtgcaatta 634

                                                                       
Query: 61  tgcatgtacttgtttcagtgtcatggagttcataaattcataatttaataatttttcagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tgcatgtacttgtttcagtgtcatggagttcataaattcataatttaataatttttcagt 574

                                                                       
Query: 121 tcacttctcctatcctggaatttgacatgccttgtgttttggtattacagtttatgcttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tcacttctcctatcctggaatttgacatgccttgtgttttggtattacagtttatgcttt 514

                                                                       
Query: 181 cttggacatctattctggagtgtttagaagtaacagttacataatgttttagcttgacca 240
           ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 513 cttggacatctattctggagtgtatggaagtaacagttacataatgttttagcttgacca 454

                                                                       
Query: 241 tactatggtcatacatagttccagaaagaatgaatttgaaccaccggtactggtccttta 300
           |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 453 tactatgggcatacatagttccagaaagaatgaatttgaaccaccagtactggtccttta 394

                                                                       
Query: 301 aaagttcattttctatttaagatcttctgtttatatgcatcaaattctctttgattcacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aaagttcattttctatttaagatcttctgtttatatgcatcaaattctctttgattcacc 334

                                                                       
Query: 361 aaaaggtggatttttttctaacttgtgctatccctatcatcacttttttctcaagttcaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aaaaggtggatttttttctaacttgtgctatccctatcatcacttttttctcaagttcaa 274

                                                                       
Query: 421 ggatgccttcactgaaaactaagaaactggttagcatgaatcataggcatgaaaaggaac 480
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 273 ggatgccttcactgaaaactaagaaactggttaacatgaatcataggcatgaaaaggaac 214

                        
Query: 481 ataaagaatgacc 493
           |||||||||||||
Sbjct: 213 ataaagaatgacc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space:   426489
Effective search space used:   426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)