Query= MSMg01no412_j18.b1 MSMg01no412_j18.b1 CHROMAT_FILE:
MSMg01no412_j18.b1 PHD_FILE: MSMg01no412_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:02 2005
(464 letters)
>mm_chr4_24912702_24913569
Length = 868
Score = 847 bits (438), Expect = 0.0
Identities = 459/468 (98%), Gaps = 4/468 (0%)
Strand = Plus / Plus
Query: 1 ctgccctgctgcttcccagccacccagctgcctcttttactcaacttcacagtttcacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgccctgctgcttcccagccacccagctgcctcttttactcaacttcacagtttcacag 260
Query: 61 ccacttgtaagcctttcagctgccactctcaagatttcagcttctcagctgtcttataca 120
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 ccacttgtaagcctttcagctgccactctaaagatttcagcttctcagctgtcttatacg 320
Query: 121 tctgagctggcattttggaattggcttatgcatagtgaagaagtgggattgactacagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgagctggcattttggaattggcttatgcatagtgaagaagtgggattgactacagaa 380
Query: 181 tcaccacctcgctgtctcccatattttaatctctgaaatctgaattcctcaagttccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaccacctcgctgtctcccatattttaatctctgaaatctgaattcctcaagttccctt 440
Query: 241 gctctggtagttcttatatatcttcaaggaggttctcagcagttatccattgtgtatggc 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctctggtagttcttagatatcttcaaggaggttctcagcagttatccattgtgtatggc 500
Query: 301 cctgtgtttgctggagtgttggtttgtctttgtcagagaaggcagttgatgcagctttct 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 cctgtgtttgctggagtgttggtttgtctttgtcagacaaggcagttgatgcagctttct 560
Query: 361 gaattacggcttatgtgaaattccattggtggactatctattttaatttctgttatcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaattacggcttatgtgaaattccattggtggactatctattttaatttctgttatcttg 620
Query: 421 atttaaagcaaaaataaaaa----ctttgaatatttgctgaacagaaa 464
|||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 621 atttaaagcaaaaaaaaaaaaaaactttgaatatttgctgaacagaaa 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 868
Length adjustment: 10
Effective length of query: 454
Effective length of database: 858
Effective search space: 389532
Effective search space used: 389532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_j18.g1 MSMg01no412_j18.g1 CHROMAT_FILE:
MSMg01no412_j18.g1 PHD_FILE: MSMg01no412_j18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:02 2005
(242 letters)
>mm_chr4_25073682_25074323
Length = 642
Score = 466 bits (241), Expect = e-136
Identities = 241/241 (100%)
Strand = Plus / Minus
Query: 1 acccagctgcttggtattattctggtagaaggcctctaacttagcattccatataatagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 acccagctgcttggtattattctggtagaaggcctctaacttagcattccatataatagt 317
Query: 61 ggcctctgtcataacattcagctaatgtttgaatcctgccaattgcctaggatctctatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggcctctgtcataacattcagctaatgtttgaatcctgccaattgcctaggatctctatc 257
Query: 121 ccaattgaatgttaagaaaccaggagcatttacagaatgtaactgtggaagcagtctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ccaattgaatgttaagaaaccaggagcatttacagaatgtaactgtggaagcagtctgtt 197
Query: 181 gtggatggcccttgtgctgtttgtattttaatgttaattctgctttcccaggaggggttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gtggatggcccttgtgctgtttgtattttaatgttaattctgctttcccaggaggggttg 137
Query: 241 t 241
|
Sbjct: 136 t 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
