Query= MSMg01no414_i04.b1 MSMg01no414_i04.b1 CHROMAT_FILE:
MSMg01no414_i04.b1 PHD_FILE: MSMg01no414_i04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:34 2005
(210 letters)
>mm_chr4_19501314_19501923
Length = 610
Score = 385 bits (199), Expect = e-111
Identities = 208/211 (98%), Gaps = 2/211 (0%)
Strand = Plus / Plus
Query: 1 agtctcacccagtagttcagactagactggaattcactgagtagttcaggctatctttaa 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtctcactcagtagttcagactagactggaattcactgagtagttcaggctatctttaa 260
Query: 61 atcaatacaacagcgctgagattaaaacaatcaactttttttttt-ctttttttgagaca 119
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 261 atcaatacaacagcgctgagattaaaacaatcaactttttttttttctttttt-gagaca 319
Query: 120 gggtgtccgggattccatgctagcactcagcacattatatagctcaggatgaccttgaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gggtgtccgggattccatgctagcactcagcacattatatagctcaggatgaccttgaac 379
Query: 180 tcctgatttatgtgaccacctctcgaacgct 210
|||||||||||||||||||||||||||||||
Sbjct: 380 tcctgatttatgtgaccacctctcgaacgct 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no414_i04.g1 MSMg01no414_i04.g1 CHROMAT_FILE:
MSMg01no414_i04.g1 PHD_FILE: MSMg01no414_i04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:34 2005
(337 letters)
>mm_chr4_19657936_19658672
Length = 737
Score = 582 bits (301), Expect = e-170
Identities = 328/337 (97%)
Strand = Plus / Minus
Query: 1 catagaattctcccagcatggaaatctctctactgtttgataatgctttggaggaaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 catagaattctcccagcatggaaatctctctactgtttgataatgctttggaggaaaatg 478
Query: 61 ctaacgtgcaaagtgaaagaacattgtgaatgtttctacaataacacttgggcgtgcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 477 ctaacgtgcaaagtgaaagaacattgtgaatgtttctacaataacacttggacgtgcttg 418
Query: 121 tgacctttgcaaggttgctcatgacaattgtatggattaaaataaaagagcagagtagaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ggacctttgcaaggttgctcatgacaattgtatggattaaaataaaagagcagagtagaa 358
Query: 181 gctattttcaaatgtgacaacctctcaaagcttgtgatgcagaccatcgggctgagagtt 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 357 gctattttcaaatgtgacaacctctcaaagcttgtgatgcagatcatcgggctgagactt 298
Query: 241 tcctgtcagttcttattgtcaacaatggtaaaccttctaagaagttgtgcatattgttct 300
||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcctgccagtccttagtgtcaacaatggtaaaccttctaagaagttgtgcatattgttct 238
Query: 301 ggcgtttaaatattattgctatagataacagcttata 337
|| ||||||||||||| ||||||||||||||||||||
Sbjct: 237 ggtgtttaaatattatcgctatagataacagcttata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
