Query= MSMg01no415_a06.b1 MSMg01no415_a06.b1 CHROMAT_FILE:
MSMg01no415_a06.b1 PHD_FILE: MSMg01no415_a06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:16 2005
(157 letters)
>mm_chr4_35319081_35319640
Length = 560
Score = 250 bits (129), Expect = 4e-71
Identities = 150/157 (95%), Gaps = 5/157 (3%)
Strand = Plus / Plus
Query: 5 gaattcctaa-tt-tccatttattggcttgtctccttaggcaaa-gcttgatcactgttt 61
|||||||||| || || ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcctaagttatc-atttattggcttgtctccttaggcaaaagcttgatcactgttt 263
Query: 62 tctttgtaagtggggatcacaaccgactagcttatta-tgcagtaggatggcagatatcc 120
||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||
Sbjct: 264 tctttgtaagtggggatcacaaccgactagcttattaattcagtaggatagcagatatcc 323
Query: 121 ctaaaggtgctttgcatatgtaaatattagctttccc 157
|||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctaaaggtgctttgcatatgtaaatattagctttccc 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 560
Length adjustment: 8
Effective length of query: 149
Effective length of database: 552
Effective search space: 82248
Effective search space used: 82248
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no415_a06.g1 MSMg01no415_a06.g1 CHROMAT_FILE:
MSMg01no415_a06.g1 PHD_FILE: MSMg01no415_a06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:16 2005
(529 letters)
>mm_chr4_35501411_35502337
Length = 927
Score = 886 bits (458), Expect = 0.0
Identities = 512/546 (93%), Gaps = 28/546 (5%)
Strand = Plus / Minus
Query: 1 acttctctgggactgcgtgcctagtggccagtgtctgggtgtctgagaagtcagaggctg 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 548 acttctctgggactgcgtgcctagtggccagtgtctgggtgtctgggaagtcagaggctg 489
Query: 61 tccttaagtccttataaatgggttatttacattgttccaagcaaacaacacatggtgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tccttaagtccttataaatgggttatttacattgttccaagcaaacaacacatggtgtcc 429
Query: 121 ctgctaagaagtttgtctagtgcttctgtttaaggaggatacagttttctcttgcttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctgctaagaagtttgtctagtgcttctgtttaaggaggatacagttttctcttgcttctg 369
Query: 181 ttttaggaaggatacagttttctctaagaatggacctggttaggctagactgagacaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 368 ttttaggaaggatacagttttctctaagaatggacctggttaggctagactgaga-taat 310
Query: 241 aatcttcaggccccgttagaacgctgatcttctaagaggccaggtctcatggactgaaga 300
|| ||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 309 aaccttcagg-cccgttagaatgctgatcttctaagaggccaggtctcacggactgaaga 251
Query: 301 aaacagccacacccctctgcagctctctctctgtggaaagctaagaaattggagttctta 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 250 aaacagccacacccctctgcagctctctctctgtggaaagctaagaaa---------tta 200
Query: 361 cagcccctatttttcggtcatgggaatcaggtattttcctctgtcccagagacttttcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 cagcccctatttttcggtcatgggaatcaggtattttcctctgtcccagagacttttcac 140
Query: 421 aacttttctctgggcttccctagtcttctctttctgacagctatccttctgactctgtta 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 agcttttctctgggcttccctagtcttctctttctgacagctatccttctgactctgtta 80
Query: 481 tgtgtactcaaatca-----------------cctctcctgcagggctctgtcctgtatt 523
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 79 tgtgtactcaaatcacctctttcaatggcgtgcctctcctgcagggctctgtcctgtatt 20
Query: 524 ttctgg 529
||||||
Sbjct: 19 ttctgg 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 927
Length adjustment: 10
Effective length of query: 519
Effective length of database: 917
Effective search space: 475923
Effective search space used: 475923
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
