XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TCACCTGAGCAATACCGAATGGCTGAGAAGCAGCTGAAAAAAATGTTCAG
CGTCATCAATCTTCAGGGAAATGCAAATCAAAACAACCCTGAGATTCTAC
CTCACACCAGTCAGAATGGCTAAGATCAAAAACTCAGGTGAGAGAAGATG
CTGGTGAGGATGTTGAGAAAGAGGAACACTCCTCCATTGTTGATGGGATT
GCAAGCTTGTAAAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAA
TTGGACATAGTACTACTGGAGTATCCTGCAAAACCTCTCCTGGGCATATA
TCCACCTGGTAAGAAGGACACATGCTCTACTATGTTCATAGTAGCCATAT
TTATAATAGCCAGAAGCTGGAAAGAACCCACATGCCCCTCAACAGAGGAA
TGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTATTCAGCTAT
TAAAAAAGAATGAATTTATGGAATTCCTAGGCAAATGGATAGACCTGGAG
GGCATCATCCTGAGTTAGGTAACCCAGTCACAAAAGAACTAACATGATAT
GTACTCACTGATAAGTGGATATTAGCCCAGATACTTTGAATACCCNAGAT
ATAAGATACTATTTGTGAAACTCATGAAACTAAAGAAGAAGAAGACCAGT
GTGTGGAAACTTTGCTCTTTCTTAAAATGN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAATGATGTGTACTGATAATGCAAATCACCAA
TATGAGAGGAAAAAAGAAGTTAGAGATGTGCACTTTGGCTTTCTAAACTT
TATAACTGGTACAGGAGAAAAAGAATGTGAAAATAAGCATTTGAAAAGTG
AAATAGTTTTCTTTCTTGTTATCTACACTCTAGGATGTCTACTAAATGTA
GTTTAAAGTAAATTCAGTCTTATTCTGATTAGTCTTCATGAGTCTCCAAC
AACATAGGTTCAAATGCTTTTCAAGAAATTCACTTTTCTAAGTAAAATAT
ATTGTTCATTTCTGTGTAGTTTGCACATATGAAGATATAGTACATAGAAT
TTTTCTTATAACACATATCAAATACGGTGACAATTATAATCTCTCGTTAT
TCACTTGGTCTTTTTACCTTATAGGAGCTCTACATGTCATTGGGTGAATG
CTGGTACTTTTCTCATTAGAAGCAAATGATCTTATGCCTGCAATATTTAT
ACTAGTGAAACACTAATATACATTATGCATATAAAACACTCTTATAAAGA
TGCACTGATAATTTAAATTTTTATTTTATTTTATTGGGAAATTTATTATT
TACATTTCCAGGGTATCCCCCTTCCCCGTTTGTCTCCCAAACACAATAAC
CCCTTCCTCCCTCCCGGCTAAATAAGGGG

Query= MSMg01no415_b07.g1 MSMg01no415_b07.g1 CHROMAT_FILE:
MSMg01no415_b07.g1 PHD_FILE: MSMg01no415_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:21 2005
         (472 letters)



>mm_chr4_30344861_30345732
          Length = 872

 Score =  803 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                       
Query: 50  gttagagatgtgcactttggctttctaaactttataactggtacaggagaaaaagaatgt 109
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gttagagatgtgcactttggctttctaaactttataactggtacaggagaaaaagaatgt 309

                                                                       
Query: 110 gaaaataagcatttgaaaagtgaaatagttttctttcttgttatctacactctaggatgt 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaaaataagcatttgaaaagtgaaatagttttctttcttgttatctacactctaggatgt 369

                                                                       
Query: 170 ctactaaatgtagtttaaagtaaattcagtcttattctgattagtcttcatgagtctcca 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctactaaatgtagtttaaagtaaattcagtcttattctgattagtcttcatgagtctcca 429

                                                                       
Query: 230 acaacataggttcaaatgcttttcaagaaattcacttttctaagtaaaatatattgttca 289
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 430 acaacataggttcaaatgcttttcaagaaattcacttttctaagcaaaatatattgttca 489

                                                                       
Query: 290 tttctgtgtagtttgcacatatgaagatatagtacatagaatttttcttataacacatat 349
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 490 tttctgtgtagtttgcacatatgaagatgtagtacatagaatttttcttataacacatat 549

                                                                       
Query: 350 caaatacggtgacaattataatctctcgttattcacttggtctttttaccttataggagc 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 caaatacggtgacaattataatctctcgttattcacttggtctttttaccttataggagc 609

                                                                       
Query: 410 tctacatgtcattgggtgaatgctggtacttttctcattagaagcaaatgatcttatgcc 469
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tctacatgtcattgggtgaatgctggtacttttctcattagaagcaaatgatcttatgcc 669

              
Query: 470 tgc 472
           |||
Sbjct: 670 tgc 672


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space:   398244
Effective search space used:   398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)