GACTCACTATATCCAGAGGATCCGCGGAATTCACCAGGAATGCCAGTGGA
GAGAAGAGAGATTGGACTGTGAATGCACCCATTATAGTTGTGGGAAAAAA
TTGAGGGTAATGATGCATATTATCACCGTGAGCTGCCTAAGACCTAATTT
TGGGTTTCTCACTAATTGTGCAGCTTCAATGATGCCAAGTTTCCTCAAAT
ATGACATATGGATTAAAAAATGGAAATAAACTTTCCAAGGGCAGAGAGGT
TGCTGAGAGGTAAATAACTTGCCATGAAATCATGGCATGGAGACGACAGT
TCATATTCTCAGTACTTATTCCAGAGCTCTGTTGGTATGATGGCCAACTT
GGAATCCCAGTGCGCAGGAAGCAGAGACAGCACAAATCCCTGAAGTAAAC
CATTACTAAAACAATCAGTAAGCTCCAGTTTCAACCATGGACTTCTCTGT
AGAGCAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA
AAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGGAAGGAAGGAAGGAAG
GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAGAGAAAGAGAGAG
AAAGAAAAAGAAAGGATGAAAGAAAAAGAAAGGAAGAAAAAGAAAGGAAG
GAAGAGAGAAAGAAAGGANGAAAAAAAGAAAGAAAGGAACAAAGAAAGGA
AGAGTGAGCAACACTTAATA

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGAGGAGAGGTTGGCATGGTGAGAAGAA
GGCCACAGCTAGAGATCCCTTGCGGTGCTAGAGATGAGAGTGAAGAATTA
GATGTAGGGAAATAAAGAACATGGTGATATTATGCATGCAGGCATTGTAC
CTGATTTTCTGGAAGCCATGGCCTGTGGTTGAGTTATGCTGGAGTTGGGT
GCTGAGATCATTGATAAGTAGAAAGAGGGAGGAAAGAAGAGAATGGTTTG
TGGGACCCACAGGAGAAATGTACAGGAGACAAAAGAGCCTATGACTGCTG
TTCTATTGTAGCACAAGGAAGAAGCCTGAGTGTAACTTTAATTTTTTCAA
AACCTATTCTTAATGCTGGTTCTTAAATACTTTAATCACACTTTAGCCCA
CCACTCACCAGAAGTAGTGAGAAAGAAAGGGTATGGGGGAAGTGGATCTC
TTTATAAAGGTTCTTCTTAGAAACTCTCATCTGTGTTGTCTGGAAAGCAG
CAATTTGCTTCACGGGTTGTCAGTGGCAGCCGCGCGTTGGTGGGAGTACG
TTGTAAAGCGATGCCGCGCTCTATCGCCGCACGAGTCCCCGCNAATCGCC
TTCCGGGATCTTATTAAATATCCCTGTGGTGTCCCCCGCCCGGTACGTCA
CGCTTCCACCGTTTGTTTGACACCTCCT

Query= MSMg01no416_a02.b1 MSMg01no416_a02.b1 CHROMAT_FILE:
MSMg01no416_a02.b1 PHD_FILE: MSMg01no416_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:32 2005
         (579 letters)



>mm_chr4_68688345_68689323
          Length = 979

 Score = 1015 bits (525), Expect = 0.0
 Identities = 563/579 (97%), Gaps = 10/579 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtggagagaagagagattggactgtgaatgcacccattatagttgtgggaaaaaattga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtggagagaagagagattggactgtgaatgcacccattatagttgtgggaaaaaattga 260

                                                                       
Query: 61  gggtaatgatgcatattatcaccgtgagctgcctaagacctaattttgggtttctcacta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggtaatgatgcatattatcaccgtgagctgcctaagacctaattttgggtttctcacta 320

                                                                       
Query: 121 attgtgcagcttcaatgatgccaagtttcctcaaatatgacatatggattaaaaaatgga 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 attgtgcagcttcaatgatgccaagtttcctcaaatatgacatatggattaagaaatgga 380

                                                                       
Query: 181 aataaactttccaagggcagagaggttgctgagaggtaaataacttgccatgaaatcatg 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataaattttccaagggcagagaggttgctgagaggtaaataacttgccatgaaatcatg 440

                                                                       
Query: 241 gcatggagacgacagttcatattctcagtacttattccagagctctgttggtatgatggc 300
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcatggagacgacagttcagattctcagtacttattccagagctctgttggtatgatggc 500

                                                                       
Query: 301 caacttggaatcccagtgcgcaggaagcagagacagcacaaatccctgaagtaaaccatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 caacttggaatcccagtgcgcaggaagcagagacagcacaaatccctgaagcaaaccatt 560

                                                                       
Query: 361 actaaaacaatcagtaagctccagtttcaaccatggacttctctgtagagcaaagaaaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actaaaacaatcagtaagctccagtttcaaccatggacttctctgtagagcaaagaaaga 620

                                                                       
Query: 421 aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga 680

                                                                       
Query: 481 aag-aagaaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaag---ga 536
           ||| ||| ||||||||||||||||||||||||||||||| ||||||||||| |||   ||
Sbjct: 681 aaggaaggaaggaaggaaggaaggaaggaaggaaggaag-aaggaaggaagaaagaaaga 739

                                                  
Query: 537 a-gaaagagagaaaga----gagagaaagaaaaagaaag 570
           | ||||||||||||||    |||||||||||||||||||
Sbjct: 740 aagaaagagagaaagaaagagagagaaagaaaaagaaag 778


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 132
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)