GACTCCTATATGCGAGAGATCCGCGGAATTCCTTTCTATTACAATACTAC
TGAAAACCCTGCAGCCAGAATCTGATGACTACTTGTCACACACTGCGGTT
GCTGTGACTTGTTTAGACCAGTCAGAAGAACAAACAGTGGACGATAGCTA
GGAAGTCTTGATTGTTGTACCCTAGTTTAAACCTCTGACTACCAGCTGCT
GTGAACTGACAGCAGACTTTTGAAACAGAGGGCATGCTCTCTGTGTCTTC
AATAGTGTGCAGACTGTGAACAGGATTAACTTCTATTTTTAAGGTCTGGA
AACATTTTTTAGTAACTGAAATAATACTATTCATAAGAGAAGGCTATGAT
GAACCTCTTATGAGAAAGCTTCTTTGGAAACTTTATGCTTTTGGAGAAGG
CTTACAACATCATCACTTAGCTTTGCTATTAGTACTATAAACAGAGCCAT
TCATCACTGAGTGATACAAAAATAATTAAGGCATAGATAGCCTATTCCCT
CAGGAAATTAGCGTCTTGTGGAGAAAAGAGCACATAGGGTGCTACAACAA
AAATCCTAGCTGAGTGTAGAGAGTATCTCTTATAGGCATCACCTGTCAAT
AACAAGCTTATGGNCAATGAGCTGAGAAAGAAGACAGGAGGTGGGACAGC
TGGCAGTGGATAGAGAGCAGCACAGGGATTCGCCCAGGCACATGGAGGAG
GACA

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGAACTCTTCAGCTGGGGAACGGTGGT
AATAAAGTGTTCCCGCAACACAGACTGTTGAGAAGGATTCAACTGCGTGA
ATTCAGAACTCTTCAGCTGGGGAACAGGGTACCCGTAAGTATAGCTTTAC
AAGGTAAGTCTGGCCTTGAACTTTCTAACGAAATTCAAGACAGTCTATCA
GAAGTAAAGTGGGAAATAGCTTTACAAGGTACGTCTGGCCTTGAACTTTC
TAACGAAATTCAAGACAGTCTATCATAAGTAAAGTGGGAAATAGCTTTAC
AAGGTAAGTCTGGTCTTGAACTTTCTAACGAAATTCAAGACAGTCTATCA
GAAGTAAAGTGGGAAATAGCTTTACAAGGTATGTTTGACCTTGAACTTTC
TCTAGTGTTAGGAGCCTTTTTGTTCCTTTTCACATGTTATCAAGTGGTTA
AGGCAGGGCTGAAAATTCTGGATGAAATTCAGGGCAATCTATCAGAAGTA
AAGCGGGGAGAGAGAGTAGGAGCAAAGAGGAAATATGGTTCACAAAATAA
GTATACAGGCCTTTCCACGGGTCTTGAACCCGAGGAAAAGTTTAGGTCAG
GTAAGAATACCTGGGGAGAGATTANAAGGGAAGAAATGAAAAAGATCCAT
CTCCGGAGGTTTCTATGAGAAAGAGCCTATACTCATCACTAGATGAGCT

Query= MSMg01no416_g19.b1 MSMg01no416_g19.b1 CHROMAT_FILE:
MSMg01no416_g19.b1 PHD_FILE: MSMg01no416_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:02 2005
         (626 letters)



>mm_chr4_34585194_34586214
          Length = 1021

 Score = 1100 bits (569), Expect = 0.0
 Identities = 606/622 (97%), Gaps = 9/622 (1%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattcctttctattacaatactactgaaaaccctgcagccagaatctgatgactacttg 66
           |||||||||||||  | |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 740 gaattcctttctaggaaaatactactgtaaaccctgcagccagaatctgatgactacttg 681

                                                                       
Query: 67  tcacacactgcggttgctgtgacttgtttagaccagtcagaagaacaaacagtggacgat 126
           ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 680 tcacacactgcggctgctgtgacttgtttagaccagtcagaagaacaagcagtggacgat 621

                                                                       
Query: 127 agctaggaagtcttgattgttgtaccct-agtttaaacctctgactaccagctgctgtga 185
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 620 agctaggaagtcttgattgttgtaccctaagtttaaacctctgactaccagctgctgtga 561

                                                                       
Query: 186 actgacagcagacttttgaaacagagggcatgctctctgtgtcttcaatagtgtgcagac 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 actgacagcagacttttgaaacagagggcatgctctctgtgtcttcaatagtgtgcagac 501

                                                                       
Query: 246 tgtgaacaggattaacttctatttttaaggtctggaaacattttttagtaactgaaataa 305
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||
Sbjct: 500 tgtgaacaggattaacttctatttttaaggtctggaaacattttttagtaactga---aa 444

                                                                       
Query: 306 tactattcataagagaaggctatgatgaacctcttatgagaaagcttctttggaaacttt 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tactattcataagagaaggctatgatgaacctcttatgagaaagcttctttggaaacttt 384

                                                                       
Query: 366 atgcttttggagaaggcttacaacatcatcacttagctttgctattagtactataaacag 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atgcttttggagaaggcttacaacatcatcacttagctttgctattagtactataaacag 324

                                                                       
Query: 426 agccattcatcactgagt-gatacaaaaataattaaggcatagatagcctattccctcag 484
           |||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||
Sbjct: 323 agccattcatcactgagtggatacaaaaataattaaggc----atagcctattccctcag 268

                                                                       
Query: 485 gaaattagcgtcttgtggagaaaagagcacatagggtgctacaacaaaaatcctagctga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaaattagcgtcttgtggagaaaagagcacatagggtgctacaacaaaaatcctagctga 208

                                                                       
Query: 545 gtgtagagagtatctcttataggcatcacctgtcaataacaagcttatggncaatgagct 604
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 207 gtgtagagagtatctcttataggcatcacctgtcaataacaagcttatggccaatgagct 148

                                 
Query: 605 gagaaagaagacaggaggtggg 626
           ||||||||||||||||||||||
Sbjct: 147 gagaaagaagacaggaggtggg 126


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1021
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1011
Effective search space:   622776
Effective search space used:   622776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)