Query= MSMg01no420_l06.b1 MSMg01no420_l06.b1 CHROMAT_FILE:
MSMg01no420_l06.b1 PHD_FILE: MSMg01no420_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:38 2005
(214 letters)
>mm_chr4_103839848_103840461
Length = 614
Score = 346 bits (179), Expect = e-100
Identities = 206/215 (95%), Gaps = 2/215 (0%)
Strand = Plus / Minus
Query: 1 agtctgcacagatagactgagatcagcagggcctccagcacttagagctgttcagtccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agtctgcacagatagactgagatcagcagggcctccagcacttagagctgttcagtccga 355
Query: 61 gaatgggcaggtcagccctgagtatgcacattacacacctgaggtcctttgaggctaaat 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gaatgggcaggtcagctctgagtatgcacattacacacctgaggtcctttgaggctaaat 295
Query: 121 gagcagatgcattcagcactctggacagcaggattcag-taaccatcttcagaggttgat 179
||||||||||||||||||||||||||||||||||| || ||||||||||| ||| |||||
Sbjct: 294 gagcagatgcattcagcactctggacagcaggatt-aggtaaccatcttccgagtttgat 236
Query: 180 tctgtgatgtcccccgttccagcctcacactatgc 214
||||||| || |||| |||| ||||||||||||||
Sbjct: 235 tctgtgacgttccccattcccgcctcacactatgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no420_l06.g1 MSMg01no420_l06.g1 CHROMAT_FILE:
MSMg01no420_l06.g1 PHD_FILE: MSMg01no420_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:38 2005
(487 letters)
>mm_chr4_103700590_103701476
Length = 887
Score = 919 bits (475), Expect = 0.0
Identities = 484/487 (99%)
Strand = Plus / Plus
Query: 1 attgtctgaaatgcatggtttggaaatgctgaactagaggaagaagcaaggtggtctctg 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 attgtctgaaatgcatggtttggaaatgctgagctagaggaagaagcaaggtggtctctg 260
Query: 61 gcatatgggtataaaaattaatgaagatgccaacagatcaacttctatcgagagattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatatgggtataaaaattaatgaagatgccaacagatcaacttctatcgagagattttc 320
Query: 121 tcccaggcgacctttccaaattctggccaaactatagggatcaagtccaatacactaatc 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 tcccaggcgacctttccaaattctggccaaactgtagggatcaagtccaatacactaatc 380
Query: 181 tggcactagaggtatcacagaatttaactgtgggcccttaatttgcactggattgtactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcactagaggtatcacagaatttaactgtgggcccttaatttgcactggattgtactt 440
Query: 241 tttatgctcttgccctttccagaccacccagcagtagcttgggctctgccctgcatttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttatgctcttgccctttccagaccacccagcagtagcttgggctctgccctgcatttgg 500
Query: 301 cattaaagagtgcttggaatttgctgattcccctatagatctgcagtgtgctcttccctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cattaaagagtgcttggaatttgctgattcccctatagatctgcagtgtgctcttccctt 560
Query: 361 tggcttcccaccaggaagactatgccacctcaagttgcttcctccctggctggaacatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggcttcccaccaggaagactatgccacctcaagttgcttcctccctggctggaacatat 620
Query: 421 ctatgttccactgaggcagataccagcaggaaaacagagagggaacagtgaacaggaggg 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 621 ctatgttccactgaggcagataccagcaggaaaacagagagggaagagtgaacaggaggg 680
Query: 481 tatgacc 487
|||||||
Sbjct: 681 tatgacc 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
