Query= MSMg01no421_e10.b1 MSMg01no421_e10.b1 CHROMAT_FILE:
MSMg01no421_e10.b1 PHD_FILE: MSMg01no421_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:24 2005
(221 letters)
>mm_chr4_77743025_77743645
Length = 621
Score = 427 bits (221), Expect = e-124
Identities = 221/221 (100%)
Strand = Plus / Plus
Query: 1 aatatcttcatgttactaagtcttatgtgctgtataattgcagttttgattttcaactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatatcttcatgttactaagtcttatgtgctgtataattgcagttttgattttcaactta 260
Query: 61 catattattagagaggggcatgttattagtggtatgggaatgggtgaatgttcacatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catattattagagaggggcatgttattagtggtatgggaatgggtgaatgttcacatgcc 320
Query: 121 aacagtcataatgttctgaggtcagggacaaagtaggcattcacagatgaagatagtaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacagtcataatgttctgaggtcagggacaaagtaggcattcacagatgaagatagtaca 380
Query: 181 tgactttatctggctaaagatggagtctatataacttactc 221
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactttatctggctaaagatggagtctatataacttactc 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no421_e10.g1 MSMg01no421_e10.g1 CHROMAT_FILE:
MSMg01no421_e10.g1 PHD_FILE: MSMg01no421_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:24 2005
(341 letters)
>mm_chr4_77895219_77895959
Length = 741
Score = 516 bits (267), Expect = e-151
Identities = 310/345 (89%), Gaps = 34/345 (9%)
Strand = Plus / Minus
Query: 1 taacttctataggcaccagtcatacatgtagtacacacacactctcacacacacacacac 60
|||||||||||||||||||||||||||||||| ||
Sbjct: 596 taacttctataggcaccagtcatacatgtagt--------------------------ac 563
Query: 61 acacacacacacacacacacatctagaaaacatactatccacataaaaataaaaaggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 acacacacacacacacacacatctagaaaacatactatccacataaaaataaaaaggagt 503
Query: 121 gtattatttttaagaaactattttcttaacagaggaggttagttcactcttaaaatactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtattatttttaagaaactattttcttaacagaggaggttagttcactcttaaaatactt 443
Query: 181 ggctggccctgaagactttaccttcaattatcagttttgaaacacacaaacacaaagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 442 ggctggccctgaagactttaccttcaattatcagttttgaaacacacaaccacaaagtaa 383
Query: 241 agctacttttttt----gttatgaagttggatgtcatagttattacaatggtgttaggtt 296
||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agctacttt----acaagttatgaagttggatgtcatagttattacaatggtgttaggtt 327
Query: 297 gtatttttgttatggttttgttgctgtgataaagtgcccttaaca 341
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtatttttgttatggttttgttgctgtgataaagtgcccttaaca 282
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
