TCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACCAAATCCGCGGA
ATTCAGATACATGATTCCAAAAAAGCATTTCATATCCAAGCCACACCAGG
ACCAGAGGAGCACATATAATAAGAATGTCCATAATAAATTAAATGATTAC
TACTTGGAACATCCAGTGAGTGTTATATACTGCCAAATGCTTGAAACAAA
GTGAAAGAGAGGAAGAGTGAGCTTCAGAGGTGTTGAGGTGGCCATGGTCA
AGTCCATGAGTGTCTGGGGTCTAGATCTCTGTCTGTCTGACTCCTAGGAC
TATATATAAACCCTTAGCCATGCTCTTTTCTTCAGCTGCTTGGAATTTGG
GGCTGGCAGAGTTTAAGATCATCTGAAACTCCTAGTGGAAGCCAAGATGC
ATGCTCTGTCTGCAGAGATGAGATGAGTACCCCTGTTCAGATGCCTTTAC
CAGTCCAAAAGAACCAGAAGGCTGTCGAGCAGGGACCAGGAAGCTGCACT
CCGGATAACTAGACCGAACGTCACTCTGCCACTTTCTGGCTCGCAGCCTC
CAGTGAATCACTTAAATCCTATGGGCCCTTGTTGTTTATGCCTTCTTCAT
GCTCTGCTCCTGCCAAAAAATTTAAAATACCAGAATAAAGTTTTTTTTTT
TCCAAACGGGCCCCTTTTGTACTCCTTAAAAATTTTGTTCCCCTAAAAGG
TTTTTTTTTCCTGATTAAAAAAAAAAATGTTTCACCCTCGCTAAAAAAAA
AACCACCTTTTCCCTATAAGGGCCTAAAAATTTTCTTTATATAAACATAT
N

CATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACCACACCAGCAGAGCCATGTGTGT
CTTGACAGCACTTGGAGTGCTTTAACTTACCCTCCAGTCTGGCATGGCAG
GTGAGTATGCAGTTACTGCTACATGAAGACATGACCTCTAGGATTATCCC
CGTCTTCCATTGAAATCAAAGTTGACAAATGTGAAGTGCTAAAGACCTGT
CCCTAAATCATCTGGATCTAAATTTACTTCTCAAGAGATCATTTTGTCAG
AGTTGAAGAAAAAAGGGTCCTCTATTTTTGCTTTTTTGTTTTTTGTTTTT
GTTTTTTGAAACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCA
CTTTGTAGACCAGGCTGTCCTTGAACTCAGAAATCCGCCTGCCTCTACCT
CCCAAGTGCAGAGATTAAAGGTGTGCACCACCACTGTCTGTCAGGTTCCT
CCATTTTTGCTTGCTTGTTCGGCTATCGTTATTTCTGCATATCTAAACCT
TTTTTTTTTTTTATCTCCTTTTATACCCTCGTTACCCACTCATCCCCCTT
TATTGCTCTTTTTTTTTCACATTCTTTCTTTTCTTTTTCTCCCTTTTTTT
CCCTCTTTTATTTCTCTCTCCCTCTTTTTTTTTTTTTTTTCTTCTCCTTT
ATTTTTTTCTTCCTTCTCTTCCTCTTTTCCTCTCTTCTTTACTATTCCCC
TTACATCTATATCTCTCCCTTACACTTCCATTTTTTATTTATTCTTTTCC
CTTCTTTTTTTCTTCTTN

Query= MSMg01no421_j10.b1 MSMg01no421_j10.b1 CHROMAT_FILE:
MSMg01no421_j10.b1 PHD_FILE: MSMg01no421_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:49 2005
         (429 letters)



>mm_chr4_94832364_94833192
          Length = 829

 Score =  737 bits (381), Expect = 0.0
 Identities = 417/429 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   atttcatatccaagccacaccaggaccagaggagcacatataataagaatgtccataata 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 629 atttcatatccaagccacactaggaccagaggagcacatataataagaatgtccataata 570

                                                                       
Query: 61  aattaaatgattactacttggaacatccagtgagtgttatatactgccaaatgcttgaaa 120
           ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 569 aattaaatgattactacttcgaacatctagtgagtgttatatactgccaaatgcttgaaa 510

                                                                       
Query: 121 caaagtgaaagagaggaagagtgagcttcagaggtgttgaggtggccatggtcaagtcca 180
           |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 509 caaagtgaaagacaggaagagtgagcttcagaggtgttgaggtggctatggccaagtcca 450

                                                                       
Query: 181 tgagtgtctggggtctagatctctgtctgtctgactcctaggactatatataaaccctta 240
           ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgagtgtctggggtctagatcccagtctgtctgactcctaggactatatataaaccctta 390

                                                                       
Query: 241 gccatgctcttttcttcagctgcttggaatttggggctggcagagtttaagatcatctga 300
           ||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gccatgcacttcccttcagctgcttggaatttggggctggcagagtttaagatcatctga 330

                                                                       
Query: 301 aactcctagtggaagccaagatgcatgctctgtctgcagagatgagatgagtacccctgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aactcctagtggaagccaagatgcatgctctgtctgcagagatgagatgagtacccctgt 270

                                                                       
Query: 361 tcagatgcctttaccagtccaaaagaaccagaaggctgtcgagcagggaccaggaagctg 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 269 tcagatgcctttaccagtccaaaagaaccagaaggctgccgagcagggaccaggaagctg 210

                    
Query: 421 cactccgga 429
           |||||||||
Sbjct: 209 cactccgga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space:   344400
Effective search space used:   344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no421_j10.g1 MSMg01no421_j10.g1 CHROMAT_FILE:
MSMg01no421_j10.g1 PHD_FILE: MSMg01no421_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:49 2005
         (377 letters)



>mm_chr4_94640758_94641534
          Length = 777

 Score =  667 bits (345), Expect = 0.0
 Identities = 369/377 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaccagcagagccatgtgtgtcttgacagcacttggagtgctttaacttaccctccagt 60
           ||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||
Sbjct: 201 acaccagcagagccacgtgtgccttgacggcacttggagtgctttaacctaccctccagt 260

                                                                       
Query: 61  ctggcatggcaggtgagtatgcagttactgctacatgaagacatgacctctaggattatc 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ctggcatggcaggtgagtatgcagttactgctacatgaagacatgaactctaggattatc 320

                                                                       
Query: 121 cccgtcttccattgaaatcaaagttgacaaatgtgaagtgctaaagacctgtccctaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccgtcttccattgaaatcaaagttgacaaatgtgaagtgctaaagacctgtccctaaat 380

                                                                       
Query: 181 catctggatctaaatttacttctcaagagatcattttgtcagagttgaagaaaaaagggt 240
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagctggatctaaatttacttctcaagagatcattttgtcagagttgaagaaaaaagggt 440

                                                                       
Query: 241 cctctatttttgcttttttgttttttgtttttgttttttgaaacagggtttctctgtata 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctctatttttgtttttttgttttttgtttttgttttttgaaacagggtttctctgtata 500

                                                                       
Query: 301 gccctggctgtcctggaactcactttgtagaccaggctgtccttgaactcagaaatccgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccctggctgtcctggaactcactttgtagaccaggctgtccttgaactcagaaatccgc 560

                            
Query: 361 ctgcctctacctcccaa 377
           |||||||||||||||||
Sbjct: 561 ctgcctctacctcccaa 577


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space:   282624
Effective search space used:   282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)