NATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGC
GGAATTCTTTAATTATTCCTTTATTTTATTTTTATTTTTTTGGTCATTTC
GCCCTTTGCCCCGATTTTACCATTACAAAGTGATGGGTAAACTCCAATTG
GCCTTTTTCTCCATCTTTATTATTAAGTGGACCTTGTATCATACAGTCTT
TATCACTGTGCAGACATCAGCTAATTAGTCTGCATAGTATCCTTTTGACA
AGAACATTCCATTCACTTTTATAGTGTGCAAAACTAATAGCTAAGTCACT
TTTTCAACTCTTTACTATAAGTTCTTTATGATGTCAGCTAAATTACTAAC
CCAAAATTGCTGATGTAGGCAAAACAGGATGTTAGATAAGATCTACAGAA
TACCCTAGCTTATCCCTTTAAGACATTTTAAACATTACTCTTCACATTCT
TTTCGGTCTTTTCAAGATTTCCTGGATTTTTTTTCAGGAATTAAATAACT
TTGGTTTTTCATAAGATAACCAGTAAAAAGAAGACTGAAATAGTGACAAA
TGTTATCCACAGACAGAAATGTTCCTTTTTTTTCATTGTATTTTTATTAT
TTAAAATGGTTTTTAAATTTAGATACATTTTGTTCATTTTCTCTCCAAAC
TGCAAATTCTTATAGGTCCTATACCCCTCCCTGCCTGCTCTACTTTTTCA
AAATACAAACAAACATACTAAAACAAACCAACAAACCAAAACCAAAATCA
CAATACTACT

GCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAAACATGATGTAATACAGGTGAC
TTTGTAAATATGGATTGTCGGTCAACTAAGCATAGGAAGAGACTTGCTAC
TATATACTTGGGGTGCTGAAATTGTGTTAATCTATGACAAAAGAATCATT
GCTTTCATGTTACAAGGATCTTGTGGAGAGAAAGATAGATGAGAAATGTT
TAGTTATATAAAGGTTAAAAAAATGAATACATAATCAATAATCCTGTTTT
AACTTTCTCTTGTGTAATGATTTAATTTGTGGCTTTAGAACAGGATTTGC
AGTGATTGGTTTTGGAAAATGTTAACTTGTGGCTGTGAGGAAATTTTCTT
CCTAAATAGGAAAAGAAAAATGAATTAAGAGCATTTGCAGGAGACATCTT
GGTTCCCTGATTCCACCAAGACTAGTCTCAGCAGGTGAGAGTATGGACTA
CAGAAACTAACAGCTTCTGGGACAGGCAGGAGCCACAGAGCTTCTGAGAA
AATCCCTGTTTCAGGCTCCAGACTTTTGGGCAACTTCCCTGCCAGAGAAG
AGGTGCTCCCCCCCCACCCCCCAGCCCTGGAATGAGTTGCCAGAGCAATT
GCAGGAGACTTCTTGGTTCCTGGATCCTGCTGAGACTATTCTGCGCCAGT
GAGAGTGGGGACTACAGAAGCTAACAACTTCTGGGACAGGGCCTGTTTCG
GGCCCTCATCTTTCTGC

Query= MSMg01no421_o15.b1 MSMg01no421_o15.b1 CHROMAT_FILE:
MSMg01no421_o15.b1 PHD_FILE: MSMg01no421_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:15 2005
         (666 letters)



>mm_chr4_67161000_67162067
          Length = 1068

 Score = 1125 bits (582), Expect = 0.0
 Identities = 643/664 (96%), Gaps = 3/664 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   attctttaatt-attcctttattttatttttatttttttggtcatttcgccctttgcccc 64
           ||||||||||| |||  || |||||||||||||||||||||||||||| |||||||||||
Sbjct: 907 attctttaattaattaattaattttatttttatttttttggtcatttcaccctttgcccc 848

                                                                       
Query: 65  gattttaccattacaaagtgatgggtaaactccaattggcctttttctccatctttatta 124
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 cattttaccattacaaagtgatgggtaaactccaattggcctttttctccatctttatta 788

                                                                       
Query: 125 ttaagtggaccttgtatcatacagtctttatcactgtgcagacatcagctaattagtctg 184
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 787 ttaagtggaccttgtatcatacagtctttatcactgtgcagacaacagctaattagtctg 728

                                                                       
Query: 185 catagtatccttttgacaagaacattccattcacttttatagtgtgcaaaactaatagct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 catagtatccttttgacaagaacattccattcacttttatagtgtgcaaaactaatagct 668

                                                                       
Query: 245 aagtcactttttcaactctttactataagttctttatgatgtcagctaaattactaaccc 304
           |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 667 aagtcactttttcaactctttactataagttcattaggatgtgagctaaattactaaccc 608

                                                                       
Query: 305 aaaattgctgatgtaggcaaaacaggatgttagataagatctacagaataccctagctta 364
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aaaattgctaatgtaggcaaaacaggatgttagataagatctacagaataccctagctta 548

                                                                       
Query: 365 tccctttaagacattttaaacattactcttcacattcttttcggtcttttcaagatttcc 424
            ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 547 cccctttaagacattttaaatattactctacacattcttttcggtcttttcaagatttcc 488

                                                                       
Query: 425 tggatttttttt--caggaattaaataactttggtttttcataagataaccagtaaaaag 482
           || |||||||||  |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 487 tgaattttttttttcaggaattaaataactttggtttttcctaagataaccagtaaaagg 428

                                                                       
Query: 483 aagactgaaatagtgacaaatgttatccacagacagaaatgttccttttttttcattgta 542
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 427 aagactgaaatagtgacaaatgttatccacagacagaaatgctccttttttttcattgta 368

                                                                       
Query: 543 tttttattatttaaaatggtttttaaatttagatacattttgttcattttctctccaaac 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tttttattatttaaaatggtttttaaatttagatacattttgttcattttctctccaaac 308

                                                                       
Query: 603 tgcaaattcttataggtcctatacccctccctgcctgctctactttttcaaaatacaaac 662
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 307 tgcaaattcttataggtcctatacccctccatgcctgctctactttttcaaaatacaaac 248

               
Query: 663 aaac 666
           ||||
Sbjct: 247 aaac 244


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1068
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1058
Effective search space:   694048
Effective search space used:   694048
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)