Query= MSMg01no422_f08.b1 MSMg01no422_f08.b1 CHROMAT_FILE:
MSMg01no422_f08.b1 PHD_FILE: MSMg01no422_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:45 2005
(344 letters)
>mm_chr4_133208570_133209313
Length = 744
Score = 574 bits (297), Expect = e-168
Identities = 306/309 (99%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 37 ctcttcctcctcctcctcttcccctttttctttcttcttggggattgaacccaaaatctt 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctcttcctcctcctcctcttcccctttttctttcttcttggggattgaacccaaaatctt 685
Query: 97 ttgtaagaaaaaaattattgggggtgggtggggtggcttcttgagtgaaggcactggctt 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttgtaagaaaaaaattattgggggtgggtggggtggcttcttgagtgaaggcactggctt 625
Query: 157 cctgactggaagacctgagttcaacccctggtggtacccacggaagggacaactgacctc 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cctgactggaagacctgagttcaacccctggtggtacccacggaagggacaactgacctc 565
Query: 217 cacacatgtgccatggca-ccccccccccccgcaagatgaaagaacaggtcttgaggctt 275
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 564 cacacatgtgccatggcacccccccccccccgcaagatgaaataacaggtcttgaggctt 505
Query: 276 tttgtttttgccttgaagtgctcactgcggcctagcatgggagcacatactttaatccca 335
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttggttttgccttgaagtgctcactgcggcctagcatgggagcacatactttaatccca 445
Query: 336 gcgcttggg 344
|||||||||
Sbjct: 444 gcgcttggg 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_f08.g1 MSMg01no422_f08.g1 CHROMAT_FILE:
MSMg01no422_f08.g1 PHD_FILE: MSMg01no422_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:45 2005
(246 letters)
>mm_chr4_133028041_133028686
Length = 646
Score = 476 bits (246), Expect = e-139
Identities = 246/246 (100%)
Strand = Plus / Plus
Query: 1 aggcctagcctgggatagacatcttatgaaatgggataaaggggagggggagatggctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggcctagcctgggatagacatcttatgaaatgggataaaggggagggggagatggctca 260
Query: 61 gcaggttaagggtgtttgctgcccagtcaaaggctgggcctgtaaacctagcactgggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaggttaagggtgtttgctgcccagtcaaaggctgggcctgtaaacctagcactgggac 320
Query: 121 acagggaaggaggggcttaatgatgaccagagacaaataaagaagcaaagggtctgaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagggaaggaggggcttaatgatgaccagagacaaataaagaagcaaagggtctgaaga 380
Query: 181 cagtccttaaaaatcctcacacgaggggctggagggatggctcagtggttaagggcactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtccttaaaaatcctcacacgaggggctggagggatggctcagtggttaagggcactg 440
Query: 241 gctgct 246
||||||
Sbjct: 441 gctgct 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
