XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAT
TTCTTACTGTTAAATAGCAATATGGTGACCTTTGCTTCATGATATGATCA
ATTATGTTTTCCAGCTCTCTCCATAATCATCAAGGTTTTATCATGTACCT
TGTAGGCCACAAATTCTAAAAGTCGAGGGAATCTTTTAAAAACATGGAAG
TTGGGCACATGAATGTGTTTGTTATGTTTAGTGTTCATTTAATCATTGTT
AGCTTTCTGTCATTTTTCTTCACTTGTAACAATCAGGATAGGTTAGGGTT
GCTGCTATAACAACTAAAGAATAAATAATTAGGCAGAGTTGGCTTCGGGT
CCAGAATCTCTTCAGAGTGGCAGTGCTAGCCATGCAGACTTAACACTGCA
GATGCTTCAGCCATTATTGTATCCTCCAGGGCAACAAAGGTTTCTATAGT
TTCTGGGGAAGGAGATGGAGACTCAAGCATGGTAAATTAAATACTTCTCT
CAATGTTCACACACATTTGTTATGTATTAACAAATACATAACAACATGTC
TACTGTAACATACATGTTAACACAAAGAGTTAATATAGGCATACATATTT
TGCAGACTTCCTGAACAGTGAGGAGTAGTAGAGAGAAATCAGAAATGACC
AAAAACTTGTGATATTTCCCATCTCTTTCATCATATAATTTATATTTTAT
CTCCCCAAACTTAGCAAAAAATGAAACTCCAATTTTTCTTTGCGCCATN

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTACCATCATCATGAGATAT
GCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGTCCTGGATT
GGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTCCTGGCTTC
TGTTAGTAGGATTCTTACGTTTACCTTTCGCCATCTGGCAATCTCTGGAG
TTAGTTGTTATAGTTGGCTTTGTTAAGAGATTGTTCCTCTGTTGATTTTG
TTACCCTCTATCATTTTTTTTGGGAGACAAGCTCTCTTCTCTGAGTTTCA
GTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGGGAAGGTGT
ACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAAGGCCCAAA
ACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGGCCAGT
TGTCTGGAGTCGAAGATGTCGCCGCCTCAGAAGCTCTGTGGCTCTTGTCC
GGAAGGAGGTCGGCCGTCTGGAGTTGATGTTGGTACAGCCTCCGAAGCTC
TGTGGCTCTTGTCGGAAAAGTGGCTGGTTGTCCTGAATTGAAAATGGTGT
TCTTCTTTTTTTTCTGCGACTTTTTTCGCTCGTCCTTTATAAGTGTTGCA
CTCTGTTTTTTTTCTGATTCCCTGGATTCCCGGCCTCTTN

Query= MSMg01no422_g20.b1 MSMg01no422_g20.b1 CHROMAT_FILE:
MSMg01no422_g20.b1 PHD_FILE: MSMg01no422_g20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:52 2005
         (567 letters)



>mm_chr4_54322591_54323557
          Length = 967

 Score = 1089 bits (563), Expect = 0.0
 Identities = 563/563 (100%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcatttcttactgttaaatagcaatatggtgacctttgcttcatgatatgatca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gaattctcatttcttactgttaaatagcaatatggtgacctttgcttcatgatatgatca 708

                                                                       
Query: 65  attatgttttccagctctctccataatcatcaaggttttatcatgtaccttgtaggccac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 attatgttttccagctctctccataatcatcaaggttttatcatgtaccttgtaggccac 648

                                                                       
Query: 125 aaattctaaaagtcgagggaatcttttaaaaacatggaagttgggcacatgaatgtgttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aaattctaaaagtcgagggaatcttttaaaaacatggaagttgggcacatgaatgtgttt 588

                                                                       
Query: 185 gttatgtttagtgttcatttaatcattgttagctttctgtcatttttcttcacttgtaac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gttatgtttagtgttcatttaatcattgttagctttctgtcatttttcttcacttgtaac 528

                                                                       
Query: 245 aatcaggataggttagggttgctgctataacaactaaagaataaataattaggcagagtt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aatcaggataggttagggttgctgctataacaactaaagaataaataattaggcagagtt 468

                                                                       
Query: 305 ggcttcgggtccagaatctcttcagagtggcagtgctagccatgcagacttaacactgca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ggcttcgggtccagaatctcttcagagtggcagtgctagccatgcagacttaacactgca 408

                                                                       
Query: 365 gatgcttcagccattattgtatcctccagggcaacaaaggtttctatagtttctggggaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gatgcttcagccattattgtatcctccagggcaacaaaggtttctatagtttctggggaa 348

                                                                       
Query: 425 ggagatggagactcaagcatggtaaattaaatacttctctcaatgttcacacacatttgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ggagatggagactcaagcatggtaaattaaatacttctctcaatgttcacacacatttgt 288

                                                                       
Query: 485 tatgtattaacaaatacataacaacatgtctactgtaacatacatgttaacacaaagagt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tatgtattaacaaatacataacaacatgtctactgtaacatacatgttaacacaaagagt 228

                                  
Query: 545 taatataggcatacatattttgc 567
           |||||||||||||||||||||||
Sbjct: 227 taatataggcatacatattttgc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)