XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCANAAATCCGCGGAATTCAG
CAATGCTTCCCAAGAAACAAGATGGCCAAGAAATTTATTCCTGACATTCA
AAGCCGCTACATCTGAAAGTCCATCCACGTTCTCCACCATGTTATGTTTA
AAGAGGGGCTGGAGCAATGGCTACACTAGCAGGAGACACAGGTTGCATTC
CCAGCCCCGACATGCTGGCTGACAACTGTGACTCCAGCTCTCTCTCTGGC
TTCCACTGGTACCAAGGTACAGACACTTGCAGACAAAACAGAAAAGAAAA
AGTCTGAAAAAAATATATATATATATATTTAAAAAGCTAAGGATGGCTGG
GCATGGTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGT
GGATTTCCGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACA
GCCAGGGCTACACAGAGAAACCCTGTCTCANANNANAAAAAAAAAAAAAA
AAAAGCTAAGGATGCTGAGCCACAAAGGCGACATGTTTACCATGACCACC
ACCCTAAAGCTTAGGGGCCATTTCAGACGGCCAGAGCCAGAGGTCGGGGA
GGAATGAGGTGAGCAGTGCCTTCTCCACCTGGACAGGTCAGGGCTGCTGT
ATTTCAGGAACCCGCCAGTTGTAGCTGCTTACCAAAGAAGGGCCTAAAAA
ACAACCAGTCCTTCTTGTTAGCATTGTTGGAAAAAAAAAAGGCCCACACC
CTCCTTCCCTAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTATTCCCTCCTAAACCTCCAATGTCCCTCCCAGG
CCCAGCAGTGGGAACAAGCCAGCATGGAAAAAGTGGACAGTGCTATTAAC
TCAGAGCCCAGGATCCCCACCGTCAGCCACAGGGACACATGGACTGGGGT
AGCAGTACACAGGATTCCTGTTTTATCTAGGCACTCCCAATCTTGAGCTG
AGGCTGAGATGACCTCTGTCCCTCCCAGGGGCTGCCATACCCAGATGCTA
CAATTCGTGGCATACACAGAATTGTGCCTGCCGAGGGACACACTCTGGAG
GAATCTTGGCCATGGTCTGCTTAGAAAAGAGGGAAGGGCTGATAGGAATA
TTTCTGGACAGAAAGGCATAGACGCTGAGTTCAGAGGTTCCCATGCTGGA
AGGTCACGACCTAGTGTTGTATCCGATCTATTACATGTCCTGGGTCCTTA
AGCCTCTGAATTACAGTCTCCTCCGAGGTAGCATAAGGATACTGAAGCCC
TAGTGCCAGAGCTGGCATGATATGAAAATTGGAAAAGCCACACATCACCT
CTAAACACACACACACACACACACACACACAATCTCACACACCCACACTC
ACACACACACTTATTCCCTTTTATTCCTACCCAACTCCTGGGTAAAGAGG
GGGGTGGGAAACCCATATAGAAAAGGATTTCCTGGCCCCCCCTCCCCTGG
AGGTTCCCG

Query= MSMg01no422_n22.g1 MSMg01no422_n22.g1 CHROMAT_FILE:
MSMg01no422_n22.g1 PHD_FILE: MSMg01no422_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:25 2005
         (486 letters)



>mm_chr4_124914408_124915292
          Length = 885

 Score =  878 bits (454), Expect = 0.0
 Identities = 478/486 (98%), Gaps = 1/486 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tattccctcctaaacctccaatgtccctcccaggcccagcagtgggaacaagccagcatg 60
           |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 685 tattccctcctaaacctccagtgtccctcccaggcccagcagtgggaacaagtcagcatg 626

                                                                       
Query: 61  gaaaaagtggacagtgctattaactcagagcccaggatccccaccgtcagccacagggac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaaaaagtggacagtgctattaactcagagcccaggatccccaccgtcagccacagggac 566

                                                                       
Query: 121 acatggactggggtagcagtacacaggattcctgttttatctaggcactcccaatcttga 180
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acatggact-gggtagcagtacacaggattcctgttttatctaggcactcccaatcttga 507

                                                                       
Query: 181 gctgaggctgagatgacctctgtccctcccaggggctgccatacccagatgctacaattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 506 gctgaggctgagatgacctctgtccctcccaggggctgccatacccagatgctacaattt 447

                                                                       
Query: 241 gtggcatacacagaattgtgcctgccgagggacacactctggaggaatcttggccatggt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gtggcatacacagaattgtgcctgccgagggacacactctggaggaatcttggccatggt 387

                                                                       
Query: 301 ctgcttagaaaagagggaagggctgataggaatatttctggacagaaaggcatagacgct 360
           |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 386 ctgcttagaaaagagggaagggctgataagaatatttctggacaaaaaggcatagacgct 327

                                                                       
Query: 361 gagttcagaggttcccatgctggaaggtcacgacctagtgttgtatccgatctattacat 420
           ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 326 gagttcagaggtttccatgctggaaggtcacgacctagtgttgtatcggatctattacat 267

                                                                       
Query: 421 gtcctgggtccttaagcctctgaattacagtctcctccgaggtagcataaggatactgaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtcctgggtccttaagcctctgaattacagtctcctccgaggtagcataaggatactgaa 207

                 
Query: 481 gcccta 486
           ||||||
Sbjct: 206 gcccta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 885
Length adjustment: 10
Effective length of query: 476
Effective length of database: 875
Effective search space:   416500
Effective search space used:   416500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)