XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
ACCTGATGACCAACAAATGGCTGAGAAGCACCTGAAAAAATGTTCAACAT
CCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACTTC
ACTCCAGTCAGAATGGCTAAGATCAAAAACTCAGGTGACAGCAGATACTG
GCGAGGATGTGGAGAAAGGGGAACACTCCTCCATTGTTGGTGGGATTACA
AGCTAGTAAAACCACTCTGGAAAACAGTCTGGCGGTTCCTCAGAAAATTG
TACATAGTACTACTGTAGGATCCAGCAATACCTCTCCTGGGCATATATCC
AGAAGATGTCCCAACCGGTAAGAAGGGCACATGCTCCACTATGTTCATAG
AAGCCTTATTTATAATAACCAGAAGCTGTAAGAACCCAGATGCCCCTCAA
CAGAGGAATGGATACAGAAAATGTGGTACATTTACACACTGGAATACTAC
TCAGCTATTTTTAANAAATGAATTTATGAAATTCCTAGGCAAATGGATGG
ACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAGGAACTCA
CACAATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGGATA
CCCAAGATATAAGATATAATTTGCTAAAAACATTAACCCCAAGAAAACGA
AGAACCAAGTGTGGACACTT

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXACTGTCTCCAACTCCTGAACGGGGCTTGGG
CAGCAATATAGGCTGCATCAGGCAAGACTTGAAGGTGGTTGGTTTTGAGG
GTCTACAGAGCATGGCCTAGAGACATCTTCACTGGAGAGAGCCTTTCTGT
GTTCACTTCTCCCTATGCATCACTCCACACTTTACCTCCCCCGCCCCCAA
AAAGGGACAGAGACAACTTGGATCTTTGTACACTCAGCTCCTCCCTCTGA
ATAAAGAATCAGGAAATAAAGGTACAAGGGCTCTGGACCAGGTAATTCAT
TGATATAAGAAAAGGAATTTAACCTTTTGATATTAAGATGGGATATTTCA
CTTGCATTTAAACTAGATCTGGAATATTAGTTACTGACTCCAAATAGAGA
GAGCAGTGTTAATTGCTTCTATGAACAGGTATTAATTAATAGAAGACTGT
GGCTCCAGGTAGAAAGTATAACAGATACATATTATAATACGTATTAACTA
AATAAATGTCTGTGGCTTAATGTAGAGAGCATACAAAAAAAAAGGTGTTG
TTACAGGATGGCTGTACTATGGCGAAAGTTTAATAATTAAAATGTACCTG
CTTCCCCTAGACAGGGATTAGGGATGGGTTTAAATTAATTGCGTTAAAAA
TGCTATAAAGATATATTGCTCCTAA

Query= MSMg01no422_p19.g1 MSMg01no422_p19.g1 CHROMAT_FILE:
MSMg01no422_p19.g1 PHD_FILE: MSMg01no422_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:33 2005
         (492 letters)



>mm_chr4_113406998_113407889
          Length = 892

 Score =  588 bits (304), Expect = e-172
 Identities = 436/480 (90%), Gaps = 5/480 (1%)
 Strand = Plus / Plus

                                                                       
Query: 16  tgaacggggcttgggcagcaatataggctgcatcaggcaagacttgaaggtggttggttt 75
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 216 tgaacagggcttgggcagcaatataggctgcatcaggcaagacttgaaggtggctggttt 275

                                                                       
Query: 76  tgagggtctacagagcatggcctagaga-catcttcactggagagagcctttctgtgttc 134
            ||||||||||||||||||||||||| | |||||  |||||||||||||||| | |||||
Sbjct: 276 ggagggtctacagagcatggcctaga-agcatctaaactggagagagcctttttttgttc 334

                                                                       
Query: 135 acttctcc-ctatgcatcactccacactttacctcccccgcccccaaaaagggacagaga 193
           ||||| || |||| |||||||||||||  |||||||||| || ||||| |||| || |||
Sbjct: 335 acttc-cctctatccatcactccacaccctacctcccccacctccaaacaggggcacaga 393

                                                                       
Query: 194 caacttggatctttgtacactcagctcctccctctgaataaagaatcaggaaataaaggt 253
           ||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| 
Sbjct: 394 caacttggatctttgcacattcagctcctccctctgaataaagaatcaggtaataaaggc 453

                                                                       
Query: 254 acaagggctctggaccaggtaattcattgatataagaaaaggaatttaaccttttgatat 313
           ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| | |
Sbjct: 454 acaagggctctggaccaggtaattcattgatataagaaaagaaatataaccttttggttt 513

                                                                       
Query: 314 taagatgggatatttcacttgcattta-aactagatctggaatattagttactgactcca 372
           ||| |||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||
Sbjct: 514 taaaatgggaaatttcacttgcattttgaactagatcgggaatattagttactgactcca 573

                                                                       
Query: 373 aatagagagagcagtgttaattgcttctatgaacaggtattaattaatagaagactgtgg 432
           |||||| |||  ||||||||||| |||||| ||||||| |||||||||||||||||||||
Sbjct: 574 aatagaaagaatagtgttaattgtttctattaacaggtgttaattaatagaagactgtgg 633

                                                                       
Query: 433 ctccaggtagaaagtataacagatacatattataatacgtattaactaaataaatgtctg 492
           |||||||||||||  |||||| ||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 634 ctccaggtagaaaccataacacatatatattataatatgtattaactaaataaatttctg 693


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space:   425124
Effective search space used:   425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)