Query= MSMg01no423_c03.b1 MSMg01no423_c03.b1 CHROMAT_FILE:
MSMg01no423_c03.b1 PHD_FILE: MSMg01no423_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:44 2005
(121 letters)
>mm_chr4_150758890_150759413
Length = 524
Score = 224 bits (116), Expect = 1e-63
Identities = 121/124 (97%), Gaps = 3/124 (2%)
Strand = Plus / Plus
Query: 1 agtatttaagagttatttttcaattgttctttacattaaagtcatttttttagaatctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtatttaagagttatttttcaattgttctttacattaaagtcatttttttagaatctat 260
Query: 61 ataaaactgacca---ttttagtcactttgaggtatgaggtctgctttcactagatatgg 117
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaaactgaccaccattttagtcactttgaggtatgaggtctgctttcactagatatgg 320
Query: 118 ttat 121
||||
Sbjct: 321 ttat 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 121
Length of database: 524
Length adjustment: 8
Effective length of query: 113
Effective length of database: 516
Effective search space: 58308
Effective search space used: 58308
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no423_c03.g1 MSMg01no423_c03.g1 CHROMAT_FILE:
MSMg01no423_c03.g1 PHD_FILE: MSMg01no423_c03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:44 2005
(269 letters)
>mm_chr4_150986878_150987546
Length = 669
Score = 468 bits (242), Expect = e-136
Identities = 263/274 (95%), Gaps = 8/274 (2%)
Strand = Plus / Minus
Query: 1 ccttcttattctgcttctctgaaaccctataggtagtcagcccacacttggatttgttca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 ccttcttattctgcttctctgaaaccctataggtagtcagggtacacttggatttgttca 562
Query: 61 cattactatggattaattaggtatccatccacccatccatccgtccatccatccatcca- 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattactatggattaattaggtatccatccacccatccatccgtccatccatccatccat 502
Query: 120 -----c--ccatccatccatccatctacccatccaatatttgtgtgtgctgtgtgcatgc 172
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatccatccatccatccatccatctacccatccaatatttgtgtgtgctgtgtgcatgc 442
Query: 173 caatcaccatgattcttgcaaggacacagaaaggagcagatgagaaaaactcactaattt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caatcaccatgattcttgcaaggacacagaaaggagcagatgagaaaaactcactaattt 382
Query: 233 tagcatgcagctatcctgacactttctagaacac 266
||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcatgcagctatcctgacactttctagaacac 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
