NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCAGTATTCCCTAGCGGGCAGGCCACAGGCAGAAGTGTGACGTGG
GCGGAAGTGCAGCAGCCTCTCTTGCACTGTCCTCGGCCCAAGGGGTTAAG
GCTGGTCCTTCATGCTGTGGTCTACATGGCCCACAGGTCCTGGCTAGCAG
CACTTAGAGGGTTAAGAGCACGAGAAGTGGGTAAAAGATGTCTTTCAGAG
GTCCTTGTGGGGCTTTCCGGCTCCTGGAAGTCAGGATCGCTTTCAGCCAC
GGTGGGCCACTTTCTGTCCCATGGGGCCTCCTGGTGGGAACAGTGTTCCT
TTCTTCCAGAAGATGAGGTGGAGTGTTAGTGACACATCCTGGTTGTCATC
TCTTTCTGGAAAGCAAGGAGAAAAGGGCCGTTAGGGGACAATGAGCAAGG
CAAATGGTGGAAACACCGGGAACGTTTGCCTGAGCCATGAGAACGCGTTC
CATTTGGTCTGTAGGCTTGAGTCAGCTAAGACTCTCTCTCTCTCTCCCTC
CCTNNNNNNNNNNNNNNNNNNNNTTTTTTNNNTNTCNTTTCTGTTTTTCT
CTTTCTTTTTTTTTCCTCTCTCTGTCATCCCCTTTCTTTCTTTTTTTTTT
TTTCTGTTCTCTTGNGGTCCCTGTTTTGCTCCTCTTTTTTTCCCTCGTAT
TGCCGCTTTCCCTTCCTGTTTTCGTTGTTTTCTC

NCCCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTACAGCGAAATTCAGAGATGCTCAGAGACACTG
GGAGCCGGTGGGAGTCACTGGCTGGAAAGAAAGCAAAGAGGAAGAAGTGG
AGGATGGGTAGGGTTCGAGTCCTAGTCCTGCCACTACTAGCTGTGTGACC
ATGGCAAGATGTCTTACCGTGTGGAAGCCTCTGATTCTTCATCTCGAAGG
GGTGGCTTAATCCAGTTGGAGATGTGAGGGTAAAAGTGTAGGTCACAGAC
TGCACTGTCAGGAGTGTGGCCCTTTTTTTTTCAGTAAAGCGCAGGCAAAT
CCAGCAAATGGCTGTCTGCCTAAAAAGTAGCAATACTGCAGGTCTCTAGG
CAAACTCAAGACGACACAATTATATGGTTTGTCATAGTGCCCGTCACATG
GAACATGCATTGTTGCAATGAGTATTGACTATAATAATACTAATAACATT
AATAATATTAATACTATTAATATTTATATCCAATCTTCACTTATGATACT
TATATTGCTATGGTCTTACGCTCCTCTTCTGTTTTATTCTCCTGCATGTC
ACTTGGTCTTCACTGGCCTTATGATGTTTTTTCTTTTTTTTGTTTCTTCC
GTTTTCACCACCTTTTTCTTTTTTTTTGTTTCTTTTCTCCTCCCCCTTTC
CCCTTTTTTTTCTCCCTTTTCATTGTCCCCCTTTTTTACCTACCTTTTTT
TCCTT

Query= MSMg01no424_d09.b1 MSMg01no424_d09.b1 CHROMAT_FILE:
MSMg01no424_d09.b1 PHD_FILE: MSMg01no424_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:06 2005
         (489 letters)



>mm_chr4_34900756_34901644
          Length = 889

 Score =  839 bits (434), Expect = 0.0
 Identities = 443/446 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctagcgggcaggccacaggcagaagtgtgacgtgggcggaagtgcagcagcctctcttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctagcgggcaggccacaggcagaagtgtgacgtgggcggaagtgcagcagcctctcttg 260

                                                                       
Query: 61  cactgtcctcggcccaaggggttaaggctggtccttcatgctgtggtctacatggcccac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactgtcctcggcccaaggggttaaggctggtccttcatgctgtggtctacatggcccac 320

                                                                       
Query: 121 aggtcctggctagcagcacttagagggttaagagcacgagaagtgggtaaaagatgtctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtcctggctagcagcacttagagggttaagagcacgagaagtgggtaaaagatgtctt 380

                                                                       
Query: 181 tcagaggtccttgtggggctttccggctcctggaagtcaggatcgctttcagccacggtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagaggtccttgtggggctttccggctcctggaagtcaggatcgctttcagccacggtg 440

                                                                       
Query: 241 ggccactttctgtcccatggggcctcctggtgggaacagtgttcctttcttccagaagat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggccactttctgtcccatggggcctcctggtgggaacagtgttcctttcttccagaagat 500

                                                                       
Query: 301 gaggtggagtgttagtgacacatcctggttgtcatctctttctggaaagcaaggagaaaa 360
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaggcggagtgttagtgacacatcctggttgtcatctctttctggaaagcaaggagaaaa 560

                                                                       
Query: 361 gggccgttaggggacaatgagcaaggcaaatggtggaaacaccgggaacgtttgcctgag 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 gggccgttaggggacaatgagcaaggcaaatggtggaaacaccgggaacgtttgcctgcg 620

                                     
Query: 421 ccatgagaacgcgttccatttggtct 446
           ||||||||| ||||||||||||||||
Sbjct: 621 ccatgagaatgcgttccatttggtct 646


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space:   421041
Effective search space used:   421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)