Query= MSMg01no424_h03.b1 MSMg01no424_h03.b1 CHROMAT_FILE:
MSMg01no424_h03.b1 PHD_FILE: MSMg01no424_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:24 2005
(511 letters)
>mm_chr4_149768113_149769023
Length = 911
Score = 895 bits (463), Expect = 0.0
Identities = 496/507 (97%), Gaps = 1/507 (0%)
Strand = Plus / Plus
Query: 5 gaattcagagatccctctgcctctgcctcctgagtgctgggattaaaggcaccacgcctg 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcagagatcac-ctgcctctgcctcctgagtgctgggattaaaggcaccacgcctg 264
Query: 65 gcaagaggatctctcttaacttagtgatactaacagcctgtgttaataatttataaacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcaagaggatctctcttaacttagtgatactaacagcctgtgttaataatttataaacat 324
Query: 125 caggtgatgacttgctgcagccagtggtttatgggaaaagctgaaggtaacatttgagac 184
|||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 325 caggtgatgacttgcttcagccagtggtttttgggaaaagctgagggtaacatttgagat 384
Query: 185 cagattctgctgatctgatctaggaatgttttaatacaaaaatgttcacagcgttaactt 244
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catattctgctgatctgatgtaggaatgttttaatacaaaaatgttcacagcgttaactt 444
Query: 245 ttctctgctccttaaagaaacattatttttctccttttggcacttatcttttggaatcct 304
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttctccgctctttaaagaaacattatttttctccttttggcacttatcttttggaatcct 504
Query: 305 ttgtcttacaaattaatggtttttgacgtaatagtgtcttttcatgaagatggaaactca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgtcttacaaattaatggtttttgacgtaatagtgtcttttcatgaagatggaaactca 564
Query: 365 tgatgtggacttgtaactggcttctttaaaatctcaggtagtctgtttggaatagggctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgatgtggacttgtaactggcttctttaaaatctcaggtagtctgtttggaatagggctg 624
Query: 425 acggggcttttcattgcagcctgttagatgctgagcagggctggggtctgctctctgtga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acggggcttttcattgcagcctgttagatgctgagcagggctggggtctgctctctgtga 684
Query: 485 ggcatttcatcgccctgtaaagctagg 511
|||||||||||| ||||||||||||||
Sbjct: 685 ggcatttcatcgtcctgtaaagctagg 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_h03.g1 MSMg01no424_h03.g1 CHROMAT_FILE:
MSMg01no424_h03.g1 PHD_FILE: MSMg01no424_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:24 2005
(374 letters)
>mm_chr4_149934185_149934958
Length = 774
Score = 571 bits (295), Expect = e-167
Identities = 313/323 (96%), Gaps = 8/323 (2%)
Strand = Plus / Minus
Query: 58 ctgctcttcactcaattctcccccctcagaaattaagggaggacatttttccc------c 111
||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 774 ctgctcttcactcaattctcccccctcagaaattaagggaggaca--tttcccccccctc 717
Query: 112 cccttcgagacagggtttctctgtgtagccctggctgtcctggaactcactttgtagacc 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 cccttcgagacagggtttctctgtgtagccctggctgtcctggaactcactttgtagacc 657
Query: 172 aggctggcctcgaactcagaaatccccttgcctctgcctcccaagtgctgggattaaagg 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 aggctggcctcgaactcagaaatccccttgcctctgcctcccaagtgctgggattaaagg 597
Query: 232 cgtgcgccaccaccgtctggctgggagggcatatttctaatgctgttttcagggtagttt 291
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 cgtgcgccaccaccgcccggctgggagggcatatttctaatgctgttttcagggtagttt 537
Query: 292 tgtttgtctgtgattgttaggagtgatttgacttatgtagatcactaaaaccttaatctt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tgtttgtctgtgattgttaggagtgatttgacttatgtagatcactaaaaccttaatctt 477
Query: 352 ggccacatctggcagtatacaca 374
|||||||||||||||||||||||
Sbjct: 476 ggccacatctggcagtatacaca 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
