CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATATGTTTACAACTGAGAAATTTCCTAACATATACTAAGTACTCA
TTGCAGCAAAAATTAATGCTACTATCTATGGCAAACACTGAGTATACAGT
CAATTCACCAATTAGTTATTTAAGCACTACTGGGATTCAGCCGAGGTCCT
CAAGCTAGGCAAACATGCTATCAGATAGGTGTTTCTCTCTGCCAATGTTA
TCTCATTTTCTTGATTGCTAATTCTAAAGTTAACAAAAGCAGGTTCTTGT
CTTTAGAATGAAAAGGATGCAAATGATCTCATTAGGCACAAATCAATATA
TCAGACCCCAAAGGGAATATCTGCCAGCCTGCTTGTCTGTCTCAAGTGTG
TGTGGTGGTGGTGGTGTTTTGTTTTGAGGATGAAGAATTTATTCTTTGGN
AAAAACAGTTTCTGAGAACTGCAGAATGTAAGTGGCTGTGACTACAGGTC
ATGGACTTTCTCTCTAGACTGAAGACTACAATGGAGAAAGTGTTAGAGCA
TAGATAAATTTTACAGTGTTTATGCCAGTACAGTCTTCTTCTATTTGAAA
GCTGTTGTTCACTGGAAATCAATTTCTACAACTATAATCTACTTGGCACC
TTGTTTCTCCTCCATCCCCTCTTTCCTTTTTTCCATTGGGTTACTTGGTT
AACAAGACAGGGCTTCTTTATGATTCCTGGATGGCCCCGAACTN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGGCTAGCCCACAATACATACAT
AGAACATTTCTGGTCCCCCCCTAAAATAAATTAAGAAATAAAGAAATATA
GAGACAGACAGACAGACAGATAGCAGTCAAAATAGTCTACACTTTTAATT
CAAGCACCTGGGATTAAGAAGCAAGGGGTCTCTGTAAATATGAGGTCCCC
TGGTCTATATAGTGAGTTCCAGGAAAGCCAGGGCTACATAGTGAGACCCT
GCCTCAAATAAAAACAAAACAAATTTTCAAACAAACAAAATACTCAGAAA
GTAGTATTTAAATTGTATATATTAATTAAAAATAATTAACATCAAAACAA
ATGGAATATTTTTGAACTATATTAATAAAGTAGCCAAATTCAATTAATTA
GTAATTTGGCATTTAATAAGAACAGAAATTATGCAACATGCCAAGGACTA
AAGATAATTAAGATAAAGTCTCTGGTCTTAACAAAATTAAGGTTGCAAAT
CAGTATAGGCAGAGGAAAACATAACATAACTGTATAAAAGCCCTGAGTGC
TGTATTACTACTAAAAGCACATCCTAGGAAAAGTCAAAATCTTTCTTCTT
TCTTTCTTTTTTCCTTTCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTC
TTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTTCTTCTT

Query= MSMg01no424_j10.b1 MSMg01no424_j10.b1 CHROMAT_FILE:
MSMg01no424_j10.b1 PHD_FILE: MSMg01no424_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:35 2005
         (459 letters)



>mm_chr4_123274780_123275638
          Length = 859

 Score =  874 bits (452), Expect = 0.0
 Identities = 457/459 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgagaaatttcctaacatatactaagtactcattgcagcaaaaattaatgctactatct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ctgagaaatttcctaacatatactaagtactcattgcagcaaaaattaatgctactatct 600

                                                                       
Query: 61  atggcaaacactgagtatacagtcaattcaccaattagttatttaagcactactgggatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 atggcaaacactgagtatacagtcaattcaccaattagttatttaagcactactgggatt 540

                                                                       
Query: 121 cagccgaggtcctcaagctaggcaaacatgctatcagataggtgtttctctctgccaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cagccgaggtcctcaagctaggcaaacatgctatcagataggtgtttctctctgccaatg 480

                                                                       
Query: 181 ttatctcattttcttgattgctaattctaaagttaacaaaagcaggttcttgtctttaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttatctcattttcttgattgctaattctaaagttaacaaaagcaggttcttgtctttaga 420

                                                                       
Query: 241 atgaaaaggatgcaaatgatctcattaggcacaaatcaatatatcagaccccaaagggaa 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atgaaaaggaggcaaatgatctcattaggcacaaatcaatatatcagaccccaaagggaa 360

                                                                       
Query: 301 tatctgccagcctgcttgtctgtctcaagtgtgtgtggtggtggtggtgttttgttttga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tatctgccagcctgcttgtctgtctcaagtgtgtgtggtggtggtggtgttttgttttga 300

                                                                       
Query: 361 ggatgaagaatttattctttggnaaaaacagtttctgagaactgcagaatgtaagtggct 420
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 299 ggatgaagaatttattctttggcaaaaacagtttctgagaactgcagaatgtaagtggct 240

                                                  
Query: 421 gtgactacaggtcatggactttctctctagactgaagac 459
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gtgactacaggtcatggactttctctctagactgaagac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space:   381201
Effective search space used:   381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no424_j10.g1 MSMg01no424_j10.g1 CHROMAT_FILE:
MSMg01no424_j10.g1 PHD_FILE: MSMg01no424_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:35 2005
         (409 letters)



>mm_chr4_123130430_123131238
          Length = 809

 Score =  636 bits (329), Expect = 0.0
 Identities = 329/329 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaaacaaaatactcagaaagtagtatttaaattgtatatattaattaaaaataattaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaacaaaatactcagaaagtagtatttaaattgtatatattaattaaaaataattaac 260

                                                                       
Query: 61  atcaaaacaaatggaatatttttgaactatattaataaagtagccaaattcaattaatta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaaaacaaatggaatatttttgaactatattaataaagtagccaaattcaattaatta 320

                                                                       
Query: 121 gtaatttggcatttaataagaacagaaattatgcaacatgccaaggactaaagataatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaatttggcatttaataagaacagaaattatgcaacatgccaaggactaaagataatta 380

                                                                       
Query: 181 agataaagtctctggtcttaacaaaattaaggttgcaaatcagtataggcagaggaaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agataaagtctctggtcttaacaaaattaaggttgcaaatcagtataggcagaggaaaac 440

                                                                       
Query: 241 ataacataactgtataaaagccctgagtgctgtattactactaaaagcacatcctaggaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataacataactgtataaaagccctgagtgctgtattactactaaaagcacatcctaggaa 500

                                        
Query: 301 aagtcaaaatctttcttctttctttcttt 329
           |||||||||||||||||||||||||||||
Sbjct: 501 aagtcaaaatctttcttctttctttcttt 529


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space:   320000
Effective search space used:   320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)