TCTATACTCGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGAGTCTACGCTTTTAAGACTAAATGGTGCCAGGCAGTGGTGGCA
CGCCTTTGATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTT
CGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATAC
AGAGAAACCCTGTCTCGAAAAACCAAAAAAGAAAAGAAAAAAAGAAAAAA
AAAAAAAAAAAGACTAAATGGCACTATCACAAACCAAGTCATTATTAGAA
GGGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTNNNANTNN
NNNNNNNTTTTTTTTCTTTTGGTTTTTTTTTTGTTTTATTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTNNTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTT
TTTTTTTTTTTTNNTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTTTT
TTTTTTGTGGTGTGTTTTTTTTTTTTTTTTTGTTGTGTGTGTGTGTGTGT
GTTTTTTTTTTGTTTTTTTGTTTTTTTTTTTGTGTTTTTTTGTGTTTTGG
GGTTTTGTGTGTGTTTGTTTTGTTGTTTGTGTTTGTTTTGTTTTTGTGTT
GGTTGTTGGTCTTTCTTTGTTTTTGTTTTTGTGTTGTTTTT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGCCATAAAGGATTCTTTCTCTTTC
CTAAGTACGACACACTCTTTCCTAGGTACGACATGACAGATGCTTTTTGC
ACAGGTAATAAAAAAGGAAATAAATATTTTTGCCTACATATTAATCTTCA
CATATAGAATCTCTTTATAATTGTTGTAGCTATGTTCACAGAGAAACTGC
TTTTTGGCATAGCTACATGGGGAGTTCGTTATAGTGGTTTCTCCTTCTCC
AAGGACAGATAATCCCAATGTTAATAGCATACTTAGAGGGAACACAAAAG
CTTGACAGCTATAAACGGCACATTCATTTGAAAAGAAGCATTTTCTGGAG
GTGAGCCTGCTATTGTTCTGCCCATAAAAACTCCAAATATTGACAGAAAC
CCTTCATTAGATTTTAGAAAGCTTGCGAGTCTAGGTACCCTGATAATACA
AAAGGCATTTTCTGTGGTTAGAACCTGAGATACAAACATTACCGTTTACA
AAAGGAAAACCTTAACAAATAACTGTTCGTTCACAATTTCAAACAGTGAA
GGAAAGCTGATTTAGTGCATGAAACGGATTTTTATTTTCCTTGCTGGTTA
TCCTGATATGAAAATTTATCTGTGATAGCAATGATAAATTTTTCTGAAAT
CTGGAAGCGATGTGAAAAGACCACTGAGACGAGTAGGGATGGCTTTTCTC
CN

Query= MSMg01no424_l16.g1 MSMg01no424_l16.g1 CHROMAT_FILE:
MSMg01no424_l16.g1 PHD_FILE: MSMg01no424_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:45 2005
         (639 letters)



>mm_chr4_34851461_34852499
          Length = 1039

 Score = 1228 bits (635), Expect = 0.0
 Identities = 638/639 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agccataaaggattctttctctttcctaagtacgacacactctttcctaggtacgacatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 agccataaaggattctttctctttcctaagtacgacacactctttcctaggtacgacatg 780

                                                                       
Query: 61  acagatgctttttgcacaggtaataaaaaaggaaataaatatttttgcctacatattaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 acagatgctttttgcacaggtaataaaaaaggaaataaatatttttgcctacatattaat 720

                                                                       
Query: 121 cttcacatatagaatctctttataattgttgtagctatgttcacagagaaactgcttttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 cttcacatatagaatctctttataattgttgtagctatgttcacagagaaactgcttttt 660

                                                                       
Query: 181 ggcatagctacatggggagttcgttatagtggtttctccttctccaaggacagataatcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ggcatagctacatggggagttcgttatagtggtttctccttctccaaggacagataatcc 600

                                                                       
Query: 241 caatgttaatagcatacttagagggaacacaaaagcttgacagctataaacggcacattc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 caatgttaatagcatacttagagggaacacaaaagcttgacagctataaacggcacattc 540

                                                                       
Query: 301 atttgaaaagaagcattttctggaggtgagcctgctattgttctgcccataaaaactcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 atttgaaaagaagcattttctggaggtgagcctgctattgttctgcccataaaaactcca 480

                                                                       
Query: 361 aatattgacagaaacccttcattagattttagaaagcttgcgagtctaggtaccctgata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aatattgacagaaacccttcattagattttagaaagcttgcgagtctaggtaccctgata 420

                                                                       
Query: 421 atacaaaaggcattttctgtggttagaacctgagatacaaacattaccgtttacaaaagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atacaaaaggcattttctgtggttagaacctgagatacaaacattaccgtttacaaaagg 360

                                                                       
Query: 481 aaaaccttaacaaataactgttcgttcacaatttcaaacagtgaaggaaagctgatttag 540
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 359 aaaaccttaacaaataactgttcgttcacaatttcaaacagtgaaagaaagctgatttag 300

                                                                       
Query: 541 tgcatgaaacggatttttattttccttgctggttatcctgatatgaaaatttatctgtga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgcatgaaacggatttttattttccttgctggttatcctgatatgaaaatttatctgtga 240

                                                  
Query: 601 tagcaatgataaatttttctgaaatctggaagcgatgtg 639
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tagcaatgataaatttttctgaaatctggaagcgatgtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)