Query= MSMg01no426_a19.b1 MSMg01no426_a19.b1 CHROMAT_FILE:
MSMg01no426_a19.b1 PHD_FILE: MSMg01no426_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:26 2005
(434 letters)
>mm_chr4_6770905_6771737
Length = 833
Score = 735 bits (380), Expect = 0.0
Identities = 416/428 (97%), Gaps = 1/428 (0%)
Strand = Plus / Plus
Query: 4 ggaattctccagcatgtcctgctgtggggtggactggtttgtttgcaaatgtttttaatg 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctccagcatggcctgctgtggggtggactggtttgtttgcaaatgtttttaatg 263
Query: 64 ttcagatgccaaagaaccactagaatatggacactttttttctttttttaaacgctaaca 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 264 ttcagatgccaaagaaccactagaatatggacactttttt-ctttttttaaacgctaaca 322
Query: 124 aactaaacggagcagaagtagtggagtgaatcagatgttctgcggtccatgcatattctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aactaaacggagcagaagtagtggagtgaatcagatgttctgcggtccatgcatattctc 382
Query: 184 caatgtgttactttctatttcatctactcaaactcagtttttaaatttagcaccactctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caatgtgttactttctatttcatctactcaaactcagtttttaaatttagcaccactctc 442
Query: 244 aagccaactaaggctctgaagttttggtttttgtctatccaaactgtaggctaattgaat 303
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 443 aagccaactaaggctttgaagttttggttttggtctatccaaactgtaggctaattgaat 502
Query: 304 atgctcatgttactgctctggctggacactttcactcaaactgtaccaaagttcagtgat 363
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 503 ctgctcatgttactgctctggctggacactttccctcaaactgtaccaaagttcagtgac 562
Query: 364 tttgagccaaggctgacatggcatttcaaaataaaacgtatgcagttacagacattctaa 423
|||||||||||||||| ||||| |||||||||||||| ||||||||||||||| || |||
Sbjct: 563 tttgagccaaggctgaaatggcctttcaaaataaaacatatgcagttacagacgttgtaa 622
Query: 424 ctttttta 431
||||||||
Sbjct: 623 ctttttta 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 833
Length adjustment: 9
Effective length of query: 425
Effective length of database: 824
Effective search space: 350200
Effective search space used: 350200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_a19.g1 MSMg01no426_a19.g1 CHROMAT_FILE:
MSMg01no426_a19.g1 PHD_FILE: MSMg01no426_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:26 2005
(529 letters)
>mm_chr4_6848745_6849673
Length = 929
Score = 884 bits (457), Expect = 0.0
Identities = 478/485 (98%)
Strand = Plus / Minus
Query: 43 aaaaacatcaaaatcgttgcactttcgtaggcttagtgttttctccttttcctttttatc 102
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 928 aaaaacatcaaaatcgttgcacttttgtgggcttagtgttttctccttttcctttttatc 869
Query: 103 tttttgatttttatattactgcgggtgaatctatgccagagaacaaaataaaatgctaat 162
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 868 tttttgatttttatattactgcaggtgaatctatgccagagaacaaaataaaatgctaat 809
Query: 163 tacaacaccctgattcaataaacaatagtggcctcttctttgagaacatggtcttttaaa 222
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 808 tacaacaccctgattcaataaacaatagtggcctcttctttgagaacacggtcttttaaa 749
Query: 223 aattgtatttaaattaattttctctttctgagagccaggggaaatacatacagacttcat 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aattgtatttaaattaattttctctttctgagagccaggggaaatacatacagacttcat 689
Query: 283 aaactttgctgaatattttttgtgaagaaaaagaaactggactattggaaaagggcaaga 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aaactttgctgaatattttttgtgaagaaaaagaaactggactattggaaaagggcaaga 629
Query: 343 aaatatatctcattttagaaaaggggaaggcataaacagggttgaaatcttcatttctcc 402
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 628 aaatatatctcgttttagaaaaggggaaggtataaacagggttgaaatcttcatttctcc 569
Query: 403 agcctaagcttgcctcattgagtaaggcacattggcactaatggataataagcaacccaa 462
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agtctaagcttgcctcattgagtaaggcacattggcactaatggataataagcaacccaa 509
Query: 463 agccaaccgtggtgaggagaggggagtcttgcgacaatggcgtttcccactacatgaaca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agccaaccgtggtgaggagaggggagtcttgcgacaatggcgtttcccactacatgaaca 449
Query: 523 gtctg 527
|||||
Sbjct: 448 gtctg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|